RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 SCGNO76038 276 aa17.29■□□□□ 0.36
LHX3-202ENST00000371748 SPDEFO95238 335 aa17.29■□□□□ 0.36
LHX3-202ENST00000371748 MELTFP08582 738 aa17.29■□□□□ 0.36
LHX3-202ENST00000371748 ZMYND11Q15326 602 aa17.29■□□□□ 0.36
LHX3-202ENST00000371748 MFFQ9GZY8 342 aa17.29■□□□□ 0.36
LHX3-202ENST00000371748 GPR173Q9NS66 373 aa17.29■□□□□ 0.36
LHX3-202ENST00000371748 ZFHX4Q86UP3 3567 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 CD74P04233 296 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 ZNF735P0CB33 412 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 CD82P27701 267 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 PTGFRP43088 359 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 PCBD1P61457 104 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 SORDQ00796 357 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 NKPD1Q17RQ9 610 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 PLAC9Q5JTB6 97 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 ATRAIDQ6UW56 229 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 BPIFB2Q8N4F0 458 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 ZFP62Q8NB50 900 aaPredicted RBP17.28■□□□□ 0.36
LHX3-202ENST00000371748 SEMA6DQ8NFY4 1073 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 OR10K1Q8NGX5 313 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 MRPS24Q96EL2 167 aaKnown RBP17.28■□□□□ 0.36
LHX3-202ENST00000371748 CSAG2Q9Y5P2 127 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 FARS2O95363 451 aaKnown RBP17.28■□□□□ 0.36
LHX3-202ENST00000371748 CHRM2P08172 466 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 MMP7P09237 267 aaPredicted RBP17.28■□□□□ 0.36
LHX3-202ENST00000371748 IL32P24001 234 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 FOXG1P55316 489 aaPredicted RBP17.28■□□□□ 0.36
LHX3-202ENST00000371748 ARF1P84077 181 aaKnown RBP17.28■□□□□ 0.36
LHX3-202ENST00000371748 SLC10A1Q14973 349 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 KRTAP27-1Q3LI81 207 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 SCGB2B2Q4G0G5 96 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 ZNF766Q5HY98 468 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 CD163Q86VB7 1156 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 SLC6A7Q99884 636 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 ASCL3Q9NQ33 180 aa17.28■□□□□ 0.36
LHX3-202ENST00000371748 A0A096LPE4 126 aa17.27■□□□□ 0.36
LHX3-202ENST00000371748 A0A1W2PPZ6 126 aa17.27■□□□□ 0.36
LHX3-202ENST00000371748 SSX5O60225 188 aa17.27■□□□□ 0.36
LHX3-202ENST00000371748 GSK3AP49840 483 aa17.27■□□□□ 0.36
LHX3-202ENST00000371748 TMEM50BP56557 158 aa17.27■□□□□ 0.36
LHX3-202ENST00000371748 C11orf88Q6PI97 169 aa17.27■□□□□ 0.36
LHX3-202ENST00000371748 ZNF552Q9H707 407 aaPredicted RBP17.27■□□□□ 0.36
LHX3-202ENST00000371748 ZNF107Q9UII5 783 aaPredicted RBP17.27■□□□□ 0.36
LHX3-202ENST00000371748 KCNK7Q9Y2U2 307 aa17.27■□□□□ 0.36
LHX3-202ENST00000371748 URB1O60287 2271 aaKnown RBP17.27■□□□□ 0.35
LHX3-202ENST00000371748 CNOT1A5YKK6 2376 aaKnown RBP17.27■□□□□ 0.35
LHX3-202ENST00000371748 UBBP0CG47 229 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 C4orf46Q504U0 113 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 PABPC1L2AQ5JQF8 200 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 RNFT1Q5M7Z0 435 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 RELL2Q8NC24 303 aaPredicted RBP17.26■□□□□ 0.35
LHX3-202ENST00000371748 C10orf35Q96D05 121 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 RAB3CQ96E17 227 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 NUDT16L1Q9BRJ7 211 aaKnown RBP17.26■□□□□ 0.35
LHX3-202ENST00000371748 LINC00470Q9BZP3 86 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 POFUT1Q9H488 388 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 IFT46Q9NQC8 304 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 FAM86C1Q9NVL1 165 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 PARPBPQ9NWS1 579 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 TRAV14DV4A0A0A6YYC5 116 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 RFPL4AA6NLU0 287 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 RFPL4AL1F8VTS6 287 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 SERPINA2P20848 420 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 LY6G6FQ5SQ64 297 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 CCDC54Q8NEL0 328 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 HAS2Q92819 552 aa17.26■□□□□ 0.35
LHX3-202ENST00000371748 ALX4Q9H161 411 aaPredicted RBP17.26■□□□□ 0.35
LHX3-202ENST00000371748 NAT2P11245 290 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 RRADP55042 308 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 CPEB3Q8NE35 698 aaKnown RBP17.25■□□□□ 0.35
LHX3-202ENST00000371748 ARHGAP5-AS1Q96IT6 56 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 CST11Q9H112 138 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 BCO1Q9HAY6 547 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 ELL3Q9HB65 397 aaPredicted RBP17.25■□□□□ 0.35
LHX3-202ENST00000371748 ZNF587BE7ETH6 402 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 ZNHIT1O43257 154 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 HIST1H1DP16402 221 aaKnown RBP17.25■□□□□ 0.35
LHX3-202ENST00000371748 RNASE10Q5GAN6 216 aaKnown RBP17.25■□□□□ 0.35
LHX3-202ENST00000371748 TMED4Q7Z7H5 227 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 OR51T1Q8NGJ9 327 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 ASB13Q8WXK3 278 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 URM1Q9BTM9 101 aaKnown RBP17.25■□□□□ 0.35
LHX3-202ENST00000371748 ACKR4Q9NPB9 350 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 PTPRBP23467 1997 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 ARHGAP21Q5T5U3 1957 aa17.25■□□□□ 0.35
LHX3-202ENST00000371748 TMEM82A0PJX8 343 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 H3BUI4 141 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 RAD51DO75771 328 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 APOC3P02656 99 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 MGMTP16455 207 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 CCL11P51671 97 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 RPS27AP62979 156 aaKnown RBP17.24■□□□□ 0.35
LHX3-202ENST00000371748 PMP22Q01453 160 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 TCF15Q12870 199 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 OR56B1Q8NGI3 324 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 OR13C8Q8NGS7 320 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 S100A13Q99584 98 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 SLC25A32Q9H2D1 315 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 UPB1Q9UBR1 384 aa17.24■□□□□ 0.35
LHX3-202ENST00000371748 FAM186AA6NE01 2351 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms