RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ARL11Q969Q4 196 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 HIST1H2BAQ96A08 127 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 SIGLEC12Q96PQ1 595 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 RBM24Q9BX46 236 aaKnown RBP11.23□□□□□ -0.61
GPC3-201ENST00000370818 CNTD2Q9H8S5 307 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 SMCO4Q9NRQ5 59 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 MRPS18CQ9Y3D5 142 aaKnown RBP11.23□□□□□ -0.61
GPC3-201ENST00000370818 C5orf63A6NC05 138 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 ZNF716A6NP11 495 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 CXCL13O43927 109 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 TNFSF15O95150 251 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 SLC25A4P12235 298 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 CTSSP25774 331 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 GFRA1P56159 465 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 SPEM2Q0P670 501 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 PCGF3Q3KNV8 242 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 CDNFQ49AH0 187 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 LIN54Q6MZP7 749 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 C11orf87Q6NUJ2 197 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 ACOT7LQ6ZUV0 252 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 ABHD12BQ7Z5M8 362 aaPredicted RBP11.23□□□□□ -0.61
GPC3-201ENST00000370818 OR10D3Q8NH80 312 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 TCTEX1D2Q8WW35 142 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 C14orf79Q96F83 325 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 GAL3ST1Q99999 423 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 GGACTQ9BVM4 153 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 GPR84Q9NQS5 396 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 TMEM100Q9NV29 134 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 FLVCR1Q9Y5Y0 555 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 CACNA1HO95180 2353 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 ARGFXA6NJG6 315 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 RBBP9O75884 186 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 GDF1P27539 372 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 FAUP35544 74 aaKnown RBP11.23□□□□□ -0.61
GPC3-201ENST00000370818 GRB2P62993 217 aaKnown RBP11.23□□□□□ -0.61
GPC3-201ENST00000370818 GFOD2Q3B7J2 385 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 LRRC18Q8N456 261 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 OR5D14Q8NGL3 314 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 OR13C9Q8NGT0 318 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 ROBO4Q8WZ75 1007 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 FOXRED1Q96CU9 486 aaPredicted RBP11.23□□□□□ -0.61
GPC3-201ENST00000370818 ULBP2Q9BZM5 246 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 RCC2Q9P258 522 aaKnown RBP11.23□□□□□ -0.61
GPC3-201ENST00000370818 SLC5A6Q9Y289 635 aa11.23□□□□□ -0.61
GPC3-201ENST00000370818 NCOA6Q14686 2063 aaPredicted RBP11.22□□□□□ -0.61
GPC3-201ENST00000370818 ZNF705EA8MWA4 302 aaPredicted RBP11.22□□□□□ -0.61
GPC3-201ENST00000370818 NUDT19A8MXV4 375 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 F5H0A9 414 aaPredicted RBP11.22□□□□□ -0.61
GPC3-201ENST00000370818 CCL1P22362 96 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 GUCA1AP43080 201 aaPredicted RBP11.22□□□□□ -0.61
GPC3-201ENST00000370818 HTR5AP47898 357 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 HIST1H3AP68431 136 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 RSPO1Q2MKA7 263 aaPredicted RBP11.22□□□□□ -0.61
GPC3-201ENST00000370818 HIST2H3PS2Q5TEC6 136 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 HIST2H3AQ71DI3 136 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 FAM57BQ71RH2 274 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 ZNF283Q8N7M2 679 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 SUMF1Q8NBK3 374 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 GJC3Q8NFK1 279 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 OR51S1Q8NGJ8 323 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 OR2V1Q8NHB1 315 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 CLCC1Q96S66 551 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 HES7Q9BYE0 225 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 ALX4Q9H161 411 aaPredicted RBP11.22□□□□□ -0.61
GPC3-201ENST00000370818 TMPRSS5Q9H3S3 457 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 OR5H15A6NDH6 313 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 DBX1A6NMT0 343 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 PPIHO43447 177 aaKnown RBP11.22□□□□□ -0.61
GPC3-201ENST00000370818 NQO2P16083 231 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 PRSS3P35030 304 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 MOGAT2Q3SYC2 334 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 ABHD17BQ5VST6 288 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 OR2M7Q8NG81 312 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 NRIP2Q9BQI9 281 aa11.22□□□□□ -0.61
GPC3-201ENST00000370818 MEIS3P1A6NDR6 274 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
GPC3-201ENST00000370818 FARS2O95363 451 aaKnown RBP11.21□□□□□ -0.61
GPC3-201ENST00000370818 QRFPP83859 136 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 SRSF4Q08170 494 aaKnown RBP11.21□□□□□ -0.61
GPC3-201ENST00000370818 ABLIM2Q6H8Q1 611 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 UNQ6126/PRO20091Q6UXV3 157 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 COMMD2Q86X83 199 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 DTX1Q86Y01 620 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 SLC22A24Q8N4F4 322 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 PAQR4Q8N4S7 273 aaPredicted RBP11.21□□□□□ -0.61
GPC3-201ENST00000370818 GPX8Q8TED1 209 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 PTX4Q96A99 478 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 C14orf144Q96I85 54 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 FAM71F1Q96KD3 344 aaPredicted RBP11.21□□□□□ -0.61
GPC3-201ENST00000370818 RSRP1Q9BUV0 290 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 ZNF703Q9H7S9 590 aaPredicted RBP11.21□□□□□ -0.61
GPC3-201ENST00000370818 MMP26Q9NRE1 261 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 BOKQ9UMX3 212 aaPredicted RBP11.21□□□□□ -0.61
GPC3-201ENST00000370818 FAM96BQ9Y3D0 163 aa11.21□□□□□ -0.61
GPC3-201ENST00000370818 KIAA1549Q9HCM3 1950 aa11.21□□□□□ -0.62
GPC3-201ENST00000370818 PCNX2A6NKB5 2137 aa11.21□□□□□ -0.62
GPC3-201ENST00000370818 WIPF3A6NGB9 483 aa11.21□□□□□ -0.62
GPC3-201ENST00000370818 STMND1H3BQB6 276 aa11.21□□□□□ -0.62
GPC3-201ENST00000370818 IGLV3-1P01715 115 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms