RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 KMT5CQ86Y97 462 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 KLHDC8BQ8IXV7 354 aa16.26■□□□□ 0.19
SNX27-202ENST00000368841 NGFP01138 241 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 DHODHQ02127 395 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 ANKRD37Q7Z713 158 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 ZNF683Q8IZ20 524 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 RSRP1Q9BUV0 290 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 GABARAPL1Q9H0R8 117 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 TEX101Q9BY14 249 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 VN1R1Q9GZP7 353 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 SCPEP1Q9HB40 452 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 ERRFI1Q9UJM3 462 aaPredicted RBP16.25■□□□□ 0.19
SNX27-202ENST00000368841 SSC5DA1L4H1 1573 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 CEBPDP49716 269 aaPredicted RBP16.25■□□□□ 0.19
SNX27-202ENST00000368841 BTG1P62324 171 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 PHYHIPQ92561 330 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 SLC26A1Q9H2B4 701 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 KCNAB3O43448 404 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 FKBP2P26885 142 aaKnown RBP16.25■□□□□ 0.19
SNX27-202ENST00000368841 HFEQ30201 348 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 COA4Q9NYJ1 87 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 IGHV3-21A0A0B4J1V1 117 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 LRRC29Q8WV35 223 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 TMEM147Q9BVK8 224 aa16.25■□□□□ 0.19
SNX27-202ENST00000368841 LPAR6P43657 344 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 TNFAIP6P98066 277 aaPredicted RBP16.24■□□□□ 0.19
SNX27-202ENST00000368841 OXA1LQ15070 435 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 MIDNQ504T8 468 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 BCL2L2Q92843 193 aaPredicted RBP16.24■□□□□ 0.19
SNX27-202ENST00000368841 TRIM77I1YAP6 450 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 RAF1P04049 648 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 OCEL1Q9H607 264 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 IGHV3OR15-7A0A075B7D8 119 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 ASAH1Q13510 395 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 EAF1Q96JC9 268 aaPredicted RBP16.24■□□□□ 0.19
SNX27-202ENST00000368841 ZPBPQ9BS86 351 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 NRXN3Q9Y4C0 1643 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 HES3Q5TGS1 186 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 Q6ZNB5 142 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 KIF13AQ9H1H9 1805 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 G6PCP35575 357 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 RAE1P78406 368 aaKnown RBP16.24■□□□□ 0.19
SNX27-202ENST00000368841 VMA21Q3ZAQ7 101 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 ZNF260Q3ZCT1 412 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 FNDC7Q5VTL7 733 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 TMEM215Q68D42 235 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 SLC16A12Q6ZSM3 486 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 JUNBP17275 347 aaPredicted RBP16.24■□□□□ 0.19
SNX27-202ENST00000368841 RPL7P18124 248 aaKnown RBP16.24■□□□□ 0.19
SNX27-202ENST00000368841 SOX8P57073 446 aa16.24■□□□□ 0.19
SNX27-202ENST00000368841 NEURL1O76050 574 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 CD37P11049 281 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 CLDN20P56880 219 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 TNXAQ16473 311 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 DYNC2LI1Q8TCX1 351 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 MCHR2Q969V1 340 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 KIAA1324LA8MWY0 1029 aaPredicted RBP16.23■□□□□ 0.19
SNX27-202ENST00000368841 EPXP11678 715 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 MPLP40238 635 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 GALR1P47211 349 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 VWA1Q6PCB0 445 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 DGAT2L6Q6ZPD8 337 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 RAB18Q9NP72 206 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 ZNF425Q6IV72 752 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 CCDC190Q86UF4 302 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 ZNF429Q86V71 674 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 APOBEC3DQ96AK3 386 aaPredicted RBP16.23■□□□□ 0.19
SNX27-202ENST00000368841 TM4SF19Q96DZ7 209 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 MTCH2Q9Y6C9 303 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 MAST2Q6P0Q8 1798 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 AQP6Q13520 282 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 ZMIZ1Q9ULJ6 1067 aa16.23■□□□□ 0.19
SNX27-202ENST00000368841 CYC1P08574 325 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 MYOZ1Q9NP98 299 aaPredicted RBP16.22■□□□□ 0.19
SNX27-202ENST00000368841 PPP1CBP62140 327 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 WDR38Q5JTN6 314 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 OR10D3Q8NH80 312 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 RNF2Q99496 336 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 ZMAT5Q9UDW3 170 aaKnown RBP16.22■□□□□ 0.19
SNX27-202ENST00000368841 TMPRSS2O15393 492 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 IGLV3-27P01718 113 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 PAX5Q02548 391 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 IP6K3Q96PC2 410 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 SNCGO76070 127 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 RIMKLAQ8IXN7 391 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 YBX2Q9Y2T7 364 aaKnown RBP16.22■□□□□ 0.19
SNX27-202ENST00000368841 SPTY2D1-AS1A0A0U1RR47 76 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 MBP02144 154 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 UBALD2Q8IYN6 164 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 NT5CQ8TCD5 201 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 TTC9Q92623 222 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 K7ESF4 209 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 NPY1RP25929 384 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 CALCRP30988 508 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 NHLH1Q02575 133 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 NHLH2Q02577 135 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 ZNF628Q5EBL2 1059 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 PABPC1L2AQ5JQF8 200 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 NHLRC2Q8NBF2 726 aa16.22■□□□□ 0.19
SNX27-202ENST00000368841 TMEM37Q8WXS4 190 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms