RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 LYZL4Q96KX0 146 aa7.55□□□□□ -1.2
SNX27-201ENST00000368838 SORCS2Q96PQ0 1159 aa7.55□□□□□ -1.2
SNX27-201ENST00000368838 SDHCQ99643 169 aaPredicted RBP7.55□□□□□ -1.2
SNX27-201ENST00000368838 RNF121Q9H920 327 aa7.55□□□□□ -1.2
SNX27-201ENST00000368838 DAPK2Q9UIK4 370 aa7.55□□□□□ -1.2
SNX27-201ENST00000368838 HIVEP2P31629 2446 aa7.55□□□□□ -1.2
SNX27-201ENST00000368838 PLCE1Q9P212 2302 aa7.55□□□□□ -1.2
SNX27-201ENST00000368838 ELOA3CA0A087WX78 387 aaPredicted RBP7.54□□□□□ -1.2
SNX27-201ENST00000368838 LOC100289279A0A1B0GTE1 492 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 A0A1B0GWJ7 208 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 ZNF503-AS2A6NEH8 195 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
SNX27-201ENST00000368838 RGS5O15539 181 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 GSTZ1O43708 216 aaPredicted RBP7.54□□□□□ -1.2
SNX27-201ENST00000368838 IGHV3-9P01782 118 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 HLA-HP01893 362 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 LCATP04180 440 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 HEXAP06865 529 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 ELK1P19419 428 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 LOXP28300 417 aaPredicted RBP7.54□□□□□ -1.2
SNX27-201ENST00000368838 SLC6A9P48067 706 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 PITPNBP48739 271 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 UBE2NP61088 152 aaKnown RBP7.54□□□□□ -1.2
SNX27-201ENST00000368838 FAM3AP98173 230 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 HGFACQ04756 655 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 SSBP1Q04837 148 aaKnown RBP7.54□□□□□ -1.2
SNX27-201ENST00000368838 TSC22D1Q15714 1073 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 SNAI3Q3KNW1 292 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 RAB12Q6IQ22 244 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 CNIH2Q6PI25 160 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 FBXW12Q6X9E4 464 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 OR5AS1Q8N127 324 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 WDR31Q8NA23 367 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 STEAP2Q8NFT2 490 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 SEMA6DQ8NFY4 1073 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 AKR7LQ8NHP1 331 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 TRMT10AQ8TBZ6 339 aaKnown RBP7.54□□□□□ -1.2
SNX27-201ENST00000368838 CHPT1Q8WUD6 406 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 FGGYQ96C11 551 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 COX4I2Q96KJ9 171 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 COMMD3Q9UBI1 195 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 OR5V1Q9UGF6 321 aa7.54□□□□□ -1.2
SNX27-201ENST00000368838 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.53□□□□□ -1.2
SNX27-201ENST00000368838 A0A1W2PPK0 400 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 INAFM1C9JVW0 142 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 GOSR1O95249 250 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 PTTG1O95997 202 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 DBHP09172 617 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 ZNF35P13682 527 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 PPP3CBP16298 524 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 ZNF20P17024 532 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 APLNRP35414 380 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 CAV3P56539 151 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 QRFPP83859 136 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 MALLQ13021 153 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 TNK1Q13470 666 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 ARL6IP1Q15041 203 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 OXA1LQ15070 435 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 CNN3Q15417 329 aaKnown RBP7.53□□□□□ -1.2
SNX27-201ENST00000368838 RAB11BQ15907 218 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 TBC1D28Q2M2D7 210 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 CLVS2Q5SYC1 327 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 NAA40Q86UY6 237 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 PRIMA1Q86XR5 153 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 LYSMD2Q8IV50 215 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 SAMD12Q8N8I0 201 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 MAPK1IP1LQ8NDC0 245 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 PXT1Q8NFP0 134 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 ZNF671Q8TAW3 534 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 UBASH3BQ8TF42 649 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 HTRA1Q92743 480 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 FAM3DQ96BQ1 224 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 MRPS24Q96EL2 167 aaKnown RBP7.53□□□□□ -1.2
SNX27-201ENST00000368838 S100A16Q96FQ6 103 aaKnown RBP7.53□□□□□ -1.2
SNX27-201ENST00000368838 REEP6Q96HR9 211 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 PLEKHA1Q9HB21 404 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 RHOFQ9HBH0 211 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 NOX3Q9HBY0 568 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNX27-201ENST00000368838 TAS2R4Q9NYW5 299 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 IL36GQ9NZH8 169 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 ZNF107Q9UII5 783 aaPredicted RBP7.53□□□□□ -1.2
SNX27-201ENST00000368838 GTF2A1LQ9UNN4 478 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 RBMX2Q9Y388 322 aaKnown RBP7.53□□□□□ -1.2
SNX27-201ENST00000368838 NOP16Q9Y3C1 178 aaKnown RBP7.53□□□□□ -1.2
SNX27-201ENST00000368838 MPC1Q9Y5U8 109 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 SLC25A15Q9Y619 301 aa7.53□□□□□ -1.2
SNX27-201ENST00000368838 IGKV1-9A0A0C4DH69 117 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 ZNF816-ZNF321PA0A0X1KG74 233 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 CIB4A0PJX0 185 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 TMEM14DPA8MWL7 114 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 SULT1C2O00338 296 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 MAGEB3O15480 346 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 AKR7A2O43488 359 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 XRCC3O43542 346 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 HPGDSO60760 199 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 ZNF780AO75290 641 aaPredicted RBP7.52□□□□□ -1.2
SNX27-201ENST00000368838 CA11O75493 328 aa7.52□□□□□ -1.2
SNX27-201ENST00000368838 NCR1O76036 304 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms