RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ABHD3Q8WU67 409 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 CPNE4Q96A23 557 aaPredicted RBP7.47□□□□□ -1.21
PTPRK-206ENST00000368215 TAAR9Q96RI9 348 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 SPSB2Q99619 263 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 ZNF649Q9BS31 505 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 LUZP4Q9P127 313 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 GHRLQ9UBU3 117 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 MPDZO75970 2070 aa7.47□□□□□ -1.21
PTPRK-206ENST00000368215 CCDC187A0A096LP49 1063 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 CXCL2P19875 107 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 TUBG1P23258 451 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 SRD5A2P31213 254 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 CFHR1Q03591 330 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 PAN3Q58A45 887 aaKnown RBP7.46□□□□□ -1.21
PTPRK-206ENST00000368215 OR2W3Q7Z3T1 314 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 DPPA2Q7Z7J5 298 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 OR56B2PQ8NGI1 322 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 OR5M8Q8NGP6 311 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 C2orf50Q96LR7 162 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 UFSP2Q9NUQ7 469 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 CYB5R1Q9UHQ9 305 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 DUSP13Q9UII6 198 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 DENND4CQ5VZ89 1909 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 ZNF816-ZNF321PA0A0X1KG74 233 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 ZNF732B4DXR9 585 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 MPC2O95563 127 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 RPL12P30050 165 aaKnown RBP7.46□□□□□ -1.21
PTPRK-206ENST00000368215 RAC3P60763 192 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 RAB1AP62820 205 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 ZP4Q12836 540 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 MICBQ29980 383 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 TMEM268Q5VZI3 342 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 H3F3CQ6NXT2 135 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 TFAP2EQ6VUC0 442 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 OR5T1Q8NG75 326 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 SAP25Q8TEE9 199 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 SOSTQ9BQB4 213 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 MAGT1Q9H0U3 335 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 FAM212BQ9NTI7 297 aaPredicted RBP7.46□□□□□ -1.21
PTPRK-206ENST00000368215 KIF25Q9UIL4 384 aa7.46□□□□□ -1.21
PTPRK-206ENST00000368215 NME2P1O60361 137 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 TUSC2O75896 110 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 LIFP15018 202 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 ZNF574Q6ZN55 896 aaPredicted RBP7.46□□□□□ -1.22
PTPRK-206ENST00000368215 TMEM178AQ8NBL3 297 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 SLC25A32Q9H2D1 315 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 VSIG4Q9Y279 399 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 KCNK7Q9Y2U2 307 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 PLXNA2O75051 1894 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 MEX3AA1L020 520 aaKnown RBP7.46□□□□□ -1.22
PTPRK-206ENST00000368215 SIRPB1O00241 398 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 ST8SIA3O43173 380 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 SNAPINO95295 136 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 GABRA2P47869 451 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 RAB32Q13637 225 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 TMEM88Q6PEY1 159 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 EDEM2Q9BV94 578 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 PIGMQ9H3S5 423 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 LHFPL6Q9Y693 200 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 ICE1Q9Y2F5 2266 aa7.46□□□□□ -1.22
PTPRK-206ENST00000368215 MSTNO14793 375 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 DEGS1O15121 323 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 TIMM8AO60220 97 aaPredicted RBP7.45□□□□□ -1.22
PTPRK-206ENST00000368215 GABRA1P14867 456 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 FPR2P25090 351 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 CD80P33681 288 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 RPL23AP62750 156 aaKnown RBP7.45□□□□□ -1.22
PTPRK-206ENST00000368215 RBM39Q14498 530 aaKnown RBP7.45□□□□□ -1.22
PTPRK-206ENST00000368215 DYRK2Q92630 601 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 SPSB1Q96BD6 273 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 GPR137Q96N19 417 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 HDHD3Q9BSH5 251 aaPredicted RBP7.45□□□□□ -1.22
PTPRK-206ENST00000368215 LHX6Q9UPM6 363 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 KLF13Q9Y2Y9 288 aaPredicted RBP7.45□□□□□ -1.22
PTPRK-206ENST00000368215 E9PQ18 207 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 ADAM10O14672 748 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 SERPINA7P05543 415 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 PGA4P0DJD7 388 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 PGA3P0DJD8 388 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 BTCP35070 178 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 ASCL1P50553 236 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 FUT6P51993 359 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 PLAURQ03405 335 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 TSPO2Q5TGU0 170 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 GCNT2Q8N0V5 402 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 FBXW5Q969U6 566 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 FAM173AQ9BQD7 235 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 PECRQ9BY49 303 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 CNTNAP3Q9BZ76 1288 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 TGIF2Q9GZN2 237 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 SLC25A31Q9H0C2 315 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 G6PC2Q9NQR9 355 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
PTPRK-206ENST00000368215 HS3ST3B1Q9Y662 390 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 PLXNB3Q9ULL4 1909 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 HMSDA8MTL9 139 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 DUS4LO95620 317 aaKnown RBP7.45□□□□□ -1.22
PTPRK-206ENST00000368215 CNR1P21554 472 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 ECI1P42126 302 aa7.45□□□□□ -1.22
PTPRK-206ENST00000368215 LSM6P62312 80 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms