RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
CD48-201ENST00000368045 SCRN3Q0VDG4 424 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 TRA2AQ13595 282 aaKnown RBP eCLIP12.5□□□□□ -0.41
CD48-201ENST00000368045 FAM74A3Q4VXF1 159 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 PLXDC2Q6UX71 529 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 ZIC4Q8N9L1 334 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 SEMA6DQ8NFY4 1073 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 IER2Q9BTL4 223 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 PROK2Q9HC23 129 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 PLEK2Q9NYT0 353 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 ZNF391Q9UJN7 358 aa12.5□□□□□ -0.41
CD48-201ENST00000368045 CCDC163A0A0D9SF12 145 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 KCNAB3O43448 404 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 CBR3O75828 277 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 CST2P09228 141 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 CRYGSP22914 178 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 PTGER4P35408 488 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 PJVKQ0ZLH3 352 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 CNN3Q15417 329 aaKnown RBP12.49□□□□□ -0.41
CD48-201ENST00000368045 SGPP2Q8IWX5 399 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 SMIM8Q96KF7 97 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 AKIRIN1Q9H9L7 192 aaPredicted RBP12.49□□□□□ -0.41
CD48-201ENST00000368045 ELL3Q9HB65 397 aaPredicted RBP12.49□□□□□ -0.41
CD48-201ENST00000368045 ZNF701Q9NV72 531 aaPredicted RBP12.49□□□□□ -0.41
CD48-201ENST00000368045 PLEKHJ1Q9NW61 149 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 NDRG3Q9UGV2 375 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 A0A0C4DFX4 3053 aa12.49□□□□□ -0.41
CD48-201ENST00000368045 ACTL6AO96019 429 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 PLATP00750 562 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 IFNA21P01568 189 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 HOXA6P31267 233 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 RBM39Q14498 530 aaKnown RBP12.48□□□□□ -0.41
CD48-201ENST00000368045 SMCO1Q147U7 214 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 HLA-BQ31612 363 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 RPUSD3Q6P087 351 aaKnown RBP12.48□□□□□ -0.41
CD48-201ENST00000368045 ASCL4Q6XD76 172 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 GPR137CQ8N3F9 429 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 LRRC18Q8N456 261 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 FNDC9Q8TBE3 224 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 IFI44Q8TCB0 444 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 PIGTQ969N2 578 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 SGK3Q96BR1 496 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 GNRHR2Q96P88 292 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 UCN2Q96RP3 112 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 SEC11CQ9BY50 192 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 CNTNAP3Q9BZ76 1288 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 TUBD1Q9UJT1 453 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 MCTS1Q9ULC4 181 aaKnown RBP12.48□□□□□ -0.41
CD48-201ENST00000368045 PTRH2Q9Y3E5 179 aaKnown RBP12.48□□□□□ -0.41
CD48-201ENST00000368045 PMS2P1A4D2B8 440 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 CRYM-AS1A6NIL9 109 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 ZNF705EA8MWA4 302 aaPredicted RBP12.48□□□□□ -0.41
CD48-201ENST00000368045 SGCEO43556 437 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 GAPDHP04406 335 aaKnown RBP12.48□□□□□ -0.41
CD48-201ENST00000368045 CELA2AP08217 269 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 HOXB5P09067 269 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 TMEM225BP0DP42 221 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 MTCP1P56278 107 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 MLF1P58340 268 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 RAC3P60763 192 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 S100A10P60903 97 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 MST1LQ2TV78 715 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 GALNTL5Q7Z4T8 443 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 C6orf201Q7Z4U5 140 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 SPAG16Q8N0X2 631 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 PUSL1Q8N0Z8 303 aaKnown RBP12.48□□□□□ -0.41
CD48-201ENST00000368045 AGBL5Q8NDL9 886 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 OR51F2Q8NH61 342 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 KCNE4Q8WWG9 221 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 MAFIPQ8WZ33 124 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 MR1Q95460 341 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 FBXO17Q96EF6 278 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 ZNF2Q9BSG1 426 aaPredicted RBP12.48□□□□□ -0.41
CD48-201ENST00000368045 HPF1Q9NWY4 346 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 PRR13Q9NZ81 148 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 ANXA10Q9UJ72 324 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 PILRBQ9UKJ0 227 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 HS3ST3B1Q9Y662 390 aa12.48□□□□□ -0.41
CD48-201ENST00000368045 IGHV3-15A0A0B4J1V0 119 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 A0A0J9YW62 118 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 SIGLEC5O15389 551 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 SYNGR3O43761 229 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 KLF7O75840 302 aaPredicted RBP12.47□□□□□ -0.41
CD48-201ENST00000368045 CST4P01036 141 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 KNG1P01042 644 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 HKR1P10072 659 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 ZNF708P17019 499 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 GABRR1P24046 479 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 SIGLEC14Q08ET2 396 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 RSU1Q15404 277 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 IAH1Q2TAA2 248 aaPredicted RBP12.47□□□□□ -0.41
CD48-201ENST00000368045 KRTAP27-1Q3LI81 207 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 LHFPL2Q6ZUX7 228 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 RPS19BP1Q86WX3 136 aaKnown RBP12.47□□□□□ -0.41
CD48-201ENST00000368045 DTX1Q86Y01 620 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 ZNF100Q8IYN0 542 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 TMEM156Q8N614 296 aa12.47□□□□□ -0.41
CD48-201ENST00000368045 BOLLQ8N9W6 283 aaKnown RBP12.47□□□□□ -0.41
CD48-201ENST00000368045 BHLHE23Q8NDY6 225 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms