RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 CYR61O00622 381 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 TERTO14746 1132 aaKnown RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 SKP2Q13309 424 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 PDGFBP01127 241 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 MBPP02686 304 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 HPXP02790 462 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 NGFRP08138 427 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 RFC3P40938 356 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 COL13A1Q5TAT6 717 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 MOGAT1Q96PD6 335 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 NUDT16L1Q9BRJ7 211 aaKnown RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 TMEM231Q9H6L2 316 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 CDC14BO60729 498 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR8B8Q15620 311 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 ORAI1Q96D31 301 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 SPACA5Q96QH8 159 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 CCDC187A0A096LP49 1063 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 GAPDHP04406 335 aaKnown RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 TRMT61AQ96FX7 289 aaKnown RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF586Q9NXT0 402 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 RASL12Q9NYN1 266 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 THADAQ6YHU6 1953 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 GCM2O75603 506 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 PTHLHP12272 177 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 FAHP16930 419 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 SDHBP21912 280 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 LSM6P62312 80 aaKnown RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR11G2Q8NGC1 345 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 GPANK1O95872 356 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR8U8P0C7N1 319 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 FOXF1Q12946 379 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR8G2PQ6IF36 304 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZFP62Q8NB50 900 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 LRRC61Q9BV99 259 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 DSCR4P56555 118 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF707Q96C28 371 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF808Q8N4W9 903 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 TMEM178AQ8NBL3 297 aa10.54□□□□□ -0.72
CDC42BPA-202ENST00000366764 MOGAT2Q3SYC2 334 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR52N4Q8NGI2 321 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 ELOA3CA0A087WX78 387 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 ERVH48-1M5A8F1 160 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 TOX3O15405 576 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR2J2O76002 312 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 OPN1MWP04001 364 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 OPN1MW2P0DN77 364 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 OPN1MW3P0DN78 364 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 WSB2Q9NYS7 404 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 WSB1Q9Y6I7 421 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 MDH2P40926 338 aaKnown RBP10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 PI3P19957 117 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 IFITM2Q01629 132 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR2T2Q6IF00 324 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 MBD1Q9UIS9 605 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 PPIAP62937 165 aaKnown RBP10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 MUCL1Q96DR8 90 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF845Q96IR2 970 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 SERTAD4Q9NUC0 356 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 CADM4Q8NFZ8 388 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 SIRT7Q9NRC8 400 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 PSG6Q00889 435 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 SLC35G3Q8N808 338 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR4F5Q8NH21 305 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR51H1Q8NH63 302 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR4F4Q96R69 305 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 GPA33Q99795 319 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 CNTD2Q9H8S5 307 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 MFNGO00587 321 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 FER1L6-AS2Q96M78 137 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 VN1R1Q9GZP7 353 aa10.53□□□□□ -0.72
CDC42BPA-202ENST00000366764 TXNDC12O95881 172 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 NMBP08949 121 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 IQCJQ1A5X6 159 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 OR52W1Q6IF63 320 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 ZNF250P15622 560 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 CTRB1P17538 263 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 GFERP55789 205 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 CTRB2Q6GPI1 263 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 SLC25A26Q70HW3 274 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 PARP11Q9NR21 331 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 TNFSF18Q9UNG2 199 aa10.52□□□□□ -0.72
CDC42BPA-202ENST00000366764 LANCL1O43813 399 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 SRFP11831 508 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 NCR3LG1Q68D85 454 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 TMEM123Q8N131 208 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 CASP6P55212 293 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 TAS2R45P59539 299 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 HTRA3P83110 453 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 SMIM21Q3B7S5 101 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 ASB10Q8WXI3 467 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 PDCD6O75340 191 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 CBR1P16152 277 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 IL3RAP26951 378 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 VAX1Q5SQQ9 334 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 TIPARPQ7Z3E1 657 aaKnown RBP10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 NCOA6Q14686 2063 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 A6NCN8 305 aa10.52□□□□□ -0.73
CDC42BPA-202ENST00000366764 AP4M1O00189 453 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms