RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM251Q8N6I4 163 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM229BQ8NBD8 167 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 LHFPL5Q8TAF8 219 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 LPAR3Q9UBY5 353 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 LSM2Q9Y333 95 aaKnown RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM238LA0A1B0GVL6 79 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 A6NJY4 79 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 CEBPBP17676 345 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 LAIR1Q6GTX8 287 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 SFTPA2Q8IWL1 248 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 SFTPA1Q8IWL2 248 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 MRPL43Q8N983 215 aaKnown RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 BVESQ8NE79 360 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 OR1L4Q8NGR5 311 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 PARD6GQ9BYG4 376 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 RAB1BQ9H0U4 201 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 KIR3DX1Q9H7L2 352 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 DRGXA6NNA5 263 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 M0R135 149 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 PTHLHP12272 177 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 AVPR2P30518 371 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 UBTD2Q8WUN7 234 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 ZNF799Q96GE5 643 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 KLF16Q9BXK1 252 aaPredicted RBP11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 UQCC1Q9NVA1 299 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 CD27P26842 260 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 BRS3P32247 399 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 SSX1Q16384 188 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 HFEQ30201 348 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 ZNF766Q5HY98 468 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 MTURNQ8N3F0 131 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 FADS6Q8N9I5 356 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 PP6455Q8WZ26 134 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 PERPQ96FX8 193 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 LINC00597Q9H2U6 94 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 GAL3ST2Q9H3Q3 398 aa11.93□□□□□ -0.5
SRGAP3-201ENST00000360413 GABRA6Q16445 453 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 DLEU7Q6UYE1 221 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 Q6ZSR9 355 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 Q9N2K0 584 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 CD300CQ08708 224 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 RGS7BPQ6MZT1 257 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM64Q6YI46 380 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 C12orf76Q8N812 135 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 SLC45A2Q9UMX9 530 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 EXOGQ9Y2C4 368 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 CDRT15L2A8MXV6 281 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 CRXO43186 299 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 PGA3P0DJD8 388 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 GPX2P18283 190 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 ZBTB25P24278 435 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 HIST3H3Q16695 136 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 ACSM5Q6NUN0 579 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 OR2T10Q8NGZ9 312 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 GJB3O75712 270 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 CBR3O75828 277 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 CLDN15P56746 228 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 ADAT1Q9BUB4 502 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 LGALS7P47929 136 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 TCTAP57738 103 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 SLC35E4Q6ICL7 350 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 DUSP18Q8NEJ0 188 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 OR52N4Q8NGI2 321 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 OR51E1Q8TCB6 317 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 MRGPRX4Q96LA9 322 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 SLIRPQ9GZT3 109 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 CHRNA10Q9GZZ6 450 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 C5orf49A4QMS7 147 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 ASCL1P50553 236 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 SLC25A35Q3KQZ1 300 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 RTP2Q5QGT7 225 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 ANAPC16Q96DE5 110 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 GPR61Q9BZJ8 451 aa11.92□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM30CPA0ZSE6 113 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 PVRP15151 417 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ACAA2P42765 397 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 SOX4Q06945 474 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 FZD2Q14332 565 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 SLC26A10Q8NG04 563 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 APOBEC3DQ96AK3 386 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 SPACA5Q96QH8 159 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 CHST6Q9GZX3 395 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 SCN4AP35499 1836 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 FAM221AA4D161 298 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 F5H697 171 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 NHLRC1Q6VVB1 395 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 DERL3Q96Q80 235 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 C1RLQ9NZP8 487 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ANXA10Q9UJ72 324 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 KRASP01116 189 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 NPY1RP25929 384 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 CD96P40200 585 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 PRTGQ2VWP7 1150 aa11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 MRPL13Q9BYD1 178 aaKnown RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ING1Q9UK53 422 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-201ENST00000360413 ZNF256Q9Y2P7 627 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms