RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 FOXJ3Q9UPW0 622 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 LOC100506127A0A0U1RQW1 187 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 CDIPTO14735 213 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 MAS1P04201 325 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 DAOP14920 347 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 SRMP19623 302 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 GALP22466 123 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 PMELP40967 661 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 GATA4P43694 442 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 PPP3R1P63098 170 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 MZT1Q08AG7 82 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 C11orf91Q3C1V1 193 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 CRIP3Q6Q6R5 217 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 ZNF826PQ6ZT77 177 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 MOGAT3Q86VF5 341 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 ANGPTL5Q86XS5 388 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 CALHM1Q8IU99 346 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 C11orf53Q8IXP5 236 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 OR52N4Q8NGI2 321 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 RAB2BQ8WUD1 216 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 PHYHIPQ92561 330 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 NKX3-1Q99801 234 aaPredicted RBP12.56□□□□□ -0.4
CCNE1-202ENST00000357943 OR51I2Q9H344 312 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 RNF167Q9H6Y7 350 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 TCF7L1Q9HCS4 588 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 DCAF16Q9NXF7 216 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 SSR3Q9UNL2 185 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 PPP1R3CQ9UQK1 317 aa12.56□□□□□ -0.4
CCNE1-202ENST00000357943 ANKRD17O75179 2603 aaKnown RBP12.56□□□□□ -0.4
CCNE1-202ENST00000357943 IGHV1-69-2A0A0G2JMI3 117 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 SHISA3A0PJX4 238 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 A6NLC8 198 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 TMEM210A6NLX4 147 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 H3BMQ9 156 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 SSX4O60224 188 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 ARL6IP5O75915 188 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 HCKP08631 526 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 PRKACBP22694 351 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 BDKRB2P30411 391 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 FGF9P31371 208 aaPredicted RBP12.55□□□□□ -0.4
CCNE1-202ENST00000357943 HAAOP46952 286 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 RBP2P50120 134 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 HOXA4Q00056 320 aaPredicted RBP12.55□□□□□ -0.4
CCNE1-202ENST00000357943 DYNC1I2Q13409 638 aaKnown RBP12.55□□□□□ -0.4
CCNE1-202ENST00000357943 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 DNAAF1Q8NEP3 725 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 CCL17Q92583 94 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 YIPF5Q969M3 257 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 RFT1Q96AA3 541 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 CENPOQ9BU64 300 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 TMEM138Q9NPI0 162 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 NOTCH2Q04721 2471 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 ARID1AO14497 2285 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 SETXQ7Z333 2677 aaKnown RBP12.55□□□□□ -0.4
CCNE1-202ENST00000357943 LRP5LA4QPB2 252 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 TRIM64BA6NI03 449 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 NOL3O60936 208 aaKnown RBP12.55□□□□□ -0.4
CCNE1-202ENST00000357943 GABARAPO95166 117 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 ADRA2CP18825 462 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 MTCP1P56278 107 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 KISS1Q15726 138 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 DDI2Q5TDH0 399 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 HAGHLQ6PII5 290 aaPredicted RBP12.55□□□□□ -0.4
CCNE1-202ENST00000357943 LHFPL2Q6ZUX7 228 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 LRRTM1Q86UE6 522 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 ZNF525Q8N782 197 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 RDH5Q92781 318 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 BCL7BQ9BQE9 202 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 TLNRD1Q9H1K6 362 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 C1orf123Q9NWV4 160 aa12.55□□□□□ -0.4
CCNE1-202ENST00000357943 MAP1AP78559 2803 aaPredicted RBP12.54□□□□□ -0.4
CCNE1-202ENST00000357943 MAGEB3O15480 346 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 AIREO43918 545 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 RP2O75695 350 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 RHBDL1O75783 438 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 PLATP00750 562 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 ALDOBP05062 364 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 TGFBR1P36897 503 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 ATP1B3P54709 279 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 LSM3P62310 102 aaKnown RBP12.54□□□□□ -0.4
CCNE1-202ENST00000357943 CTF1Q16619 201 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 TIMM50Q3ZCQ8 353 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 WDR82Q6UXN9 313 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 ZNF573Q86YE8 665 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 LRRC75A-AS1Q8N1F1 130 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 OR5D18Q8NGL1 313 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 ERGIC1Q969X5 290 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 FN3KRPQ9HA64 309 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 BARX1Q9HBU1 254 aaPredicted RBP12.54□□□□□ -0.4
CCNE1-202ENST00000357943 SNTG1Q9NSN8 517 aa12.54□□□□□ -0.4
CCNE1-202ENST00000357943 CHD3Q12873 2000 aaKnown RBP12.53□□□□□ -0.4
CCNE1-202ENST00000357943 hCG_1807616A0A1W2PRN6 198 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 C3orf80F5H4A9 247 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 SYNGR1O43759 233 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 CYB5R3P00387 301 aaPredicted RBP12.53□□□□□ -0.4
CCNE1-202ENST00000357943 MRPS11P82912 194 aaKnown RBP12.53□□□□□ -0.4
CCNE1-202ENST00000357943 CARTPTQ16568 116 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 HFEQ30201 348 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 Q8TCH9 128 aa12.53□□□□□ -0.4
CCNE1-202ENST00000357943 AQP3Q92482 292 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms