RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 AK6Q9Y3D8 172 aaKnown RBP7.89□□□□□ -1.15
UPF2-202ENST00000357604 LOC105371242A0A075B767 164 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 TRAV1-2A0A0B4J238 106 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 HAND1O96004 215 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 IGLV1-44P01699 117 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 DCDC5Q6ZRR9 648 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 OR10X1Q8NGY0 326 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 OR5P3Q8WZ94 311 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 LURAP1Q96LR2 239 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 WDR12Q9GZL7 423 aaKnown RBP7.89□□□□□ -1.15
UPF2-202ENST00000357604 FAM234AQ9H0X4 552 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 GNG12Q9UBI6 72 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 COPS3Q9UNS2 423 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 TRAV20A0A0B4J274 112 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 OGG1O15527 345 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 PLPP2O43688 288 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 MMP7P09237 267 aaPredicted RBP7.89□□□□□ -1.15
UPF2-202ENST00000357604 GNAO1P09471 354 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 EMX1Q04741 257 aaPredicted RBP7.89□□□□□ -1.15
UPF2-202ENST00000357604 MFGE8Q08431 387 aaPredicted RBP7.89□□□□□ -1.15
UPF2-202ENST00000357604 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 AVPI1Q5T686 147 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 NCR3LG1Q68D85 454 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 Q6ZTK2 550 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 SLC7A6Q92536 515 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 RFT1Q96AA3 541 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 RAB3CQ96E17 227 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 PDCD10Q9BUL8 212 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 SSBP3Q9BWW4 388 aaPredicted RBP7.89□□□□□ -1.15
UPF2-202ENST00000357604 TAS2R8Q9NYW2 309 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 BTG1P62324 171 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 IL13RA2Q14627 380 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 FDX2Q6P4F2 183 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 RFPL4BQ6ZWI9 263 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 LINC01356Q8N9X3 169 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 CCDC71LQ8N9Z2 235 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 OR5H2Q8NGV7 314 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 DCUN1D5Q9BTE7 237 aa7.89□□□□□ -1.15
UPF2-202ENST00000357604 TRBV23-1A0A0A0MS06 115 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 TMPRSS2O15393 492 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 CREBL2O60519 120 aaPredicted RBP7.88□□□□□ -1.15
UPF2-202ENST00000357604 TSPAN9O75954 239 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 ZNF250P15622 560 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 GATA3P23771 443 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 NUP62P37198 522 aaPredicted RBP7.88□□□□□ -1.15
UPF2-202ENST00000357604 GUSBP1Q15486 140 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 DCAF12L2Q5VW00 463 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 LPAR2Q9HBW0 351 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 V9GYS6 101 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 ASXL3Q9C0F0 2248 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 E7EQL1 145 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 RBMXL2O75526 392 aaKnown RBP7.88□□□□□ -1.15
UPF2-202ENST00000357604 RAB6AP20340 208 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 PRAMEF6Q5VXH4 476 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 SEM1Q6ZVN7 128 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 DGCR14Q96DF8 476 aaKnown RBP7.88□□□□□ -1.15
UPF2-202ENST00000357604 ANXA3P12429 323 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 CALCRP30988 508 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 MPV17P39210 176 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 PTGFRP43088 359 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 SCAND1P57086 179 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 FAM3AP98173 230 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 CNPY1Q3B7I2 92 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 OTPQ5XKR4 325 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 FAM3DQ96BQ1 224 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 TSC22D3Q99576 134 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 ISG20L2Q9H9L3 353 aaKnown RBP7.88□□□□□ -1.15
UPF2-202ENST00000357604 CCDC59Q9P031 241 aaKnown RBP7.88□□□□□ -1.15
UPF2-202ENST00000357604 RALYQ9UKM9 306 aaKnown RBP7.88□□□□□ -1.15
UPF2-202ENST00000357604 ZNF846Q147U1 533 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 KISS1Q15726 138 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 ZNF404Q494X3 552 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 LINC01590Q5TEZ4 76 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 SAMD12Q8N8I0 201 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 ABHD5Q8WTS1 349 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 PDCD1LG2Q9BQ51 273 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 AASSQ9UDR5 926 aa7.88□□□□□ -1.15
UPF2-202ENST00000357604 SF3B6Q9Y3B4 125 aaKnown RBP7.88□□□□□ -1.15
UPF2-202ENST00000357604 H7C417 338 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 CA11O75493 328 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 APOA2P02652 100 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 BRS3P32247 399 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 ERVK-16P61578 105 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 SLC35A2P78381 396 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 OR5D18Q8NGL1 313 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 POM121Q96HA1 1249 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 RAB18Q9NP72 206 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 ZNF69Q9UC07 566 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 CLEC2DQ9UHP7 191 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 UBE2QL1A1L167 161 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 FABP12A6NFH5 140 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 PCNX2A6NKB5 2137 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 RAB7AP51149 207 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 MPV17LQ2QL34 196 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 CMTM1Q8IZ96 169 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 KIAA1456Q9P272 454 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 SCP2D1Q9UJQ7 156 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 A0A0A6YYH2 397 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 A6NJ64 397 aa7.87□□□□□ -1.15
UPF2-202ENST00000357604 C3orf80F5H4A9 247 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms