RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ZNF154Q13106 437 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 CNN3Q15417 329 aaKnown RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 KCNJ8Q15842 424 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 RBM48Q5RL73 367 aaKnown RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 CYB5R2Q6BCY4 276 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 RPL22L1Q6P5R6 122 aaKnown RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 MOB3CQ70IA8 216 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 UTS2BQ765I0 119 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF676Q8N7Q3 588 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 LINC01356Q8N9X3 169 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 BPIFB6Q8NFQ5 453 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 OR5A2Q8NGI9 324 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF420Q8TAQ5 688 aaPredicted RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 PPP1R14AQ96A00 147 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 EAF1Q96JC9 268 aaPredicted RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 GAL3ST1Q99999 423 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 MND1Q9BWT6 205 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ISG20L2Q9H9L3 353 aaKnown RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 NEK6Q9HC98 313 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 GPR173Q9NS66 373 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 C1orf123Q9NWV4 160 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 TMEM160Q9NX00 188 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 DCAF16Q9NXF7 216 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 MED13LQ71F56 2210 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 PPIAL4EA0A075B759 164 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 hCG_1807616A0A1W2PRN6 198 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 PQLC2LA1A4F0 135 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ANKRD61A6NGH8 418 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 OOEPA6NGQ2 149 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 SRRM5B3KS81 715 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 PPIAL4DF5H284 164 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 OGG1O15527 345 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 MRPS14O60783 128 aaKnown RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 LY6G6DO95868 133 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 GRPP07492 148 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 PPIAL4FP0DN26 164 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ATF1P18846 271 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 PCMT1P22061 227 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 CD80P33681 288 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 THBS2P35442 1172 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 DVL1P1P54792 670 aaPredicted RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 LMO4P61968 165 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 SLC35A2P78381 396 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ACSM1Q08AH1 577 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 IRF3Q14653 427 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ZMYND11Q15326 602 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 MPPED2Q15777 294 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ODF4Q2M2E3 257 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF404Q494X3 552 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 OR2G6Q5TZ20 316 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 TEX36Q5VZQ5 186 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 FAM166AQ6J272 317 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 KCTD8Q6ZWB6 473 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 LRRC28Q86X40 367 aaPredicted RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF485Q8NCK3 441 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 MAPK1IP1LQ8NDC0 245 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 DNAAF1Q8NEP3 725 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 OR13C3Q8NGS6 347 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 OR51F2Q8NH61 342 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 OR5AK2Q8NH90 309 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 LRRC29Q8WV35 223 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 TSEN15Q8WW01 171 aaKnown RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 THRSPQ92748 146 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 SPSB1Q96BD6 273 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 SMIM19Q96E16 107 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 RNF170Q96K19 258 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 CNBD2Q96M20 576 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 CDCA4Q9BXL8 241 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 PKIBQ9C010 78 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 OR51I2Q9H344 312 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 PATZ1Q9HBE1 687 aaKnown RBP3.33□□□□□ -1.88
CNOT4-202ENST00000356162 UFSP2Q9NUQ7 469 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 TREM2Q9NZC2 230 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 MIOXQ9UGB7 285 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 KCNS2Q9ULS6 477 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 SLC7A11Q9UPY5 501 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 DHDHQ9UQ10 334 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 ERGIC3Q9Y282 383 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 LRCH1Q9Y2L9 728 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 POLDIP2Q9Y2S7 368 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 PPIAL4AQ9Y536 164 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 NOTCH2Q04721 2471 aa3.33□□□□□ -1.88
CNOT4-202ENST00000356162 CCDC168Q8NDH2 2452 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 TRAV38-1A0A0B4J264 116 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 TRAV20A0A0B4J274 112 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 TRBV2A0A0J9YWF9 115 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 NKX6-3A6NJ46 265 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 CEACAM18A8MTB9 384 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 B4DSR2 109 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF732B4DXR9 585 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 E9PI62 339 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 WNT9BO14905 357 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 DENRO43583 198 aaKnown RBP3.32□□□□□ -1.88
CNOT4-202ENST00000356162 RGS10O43665 173 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 FOXH1O75593 365 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 SERPINA3P01011 423 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 MT-ND2P03891 347 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 EGR1P18146 543 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 PRKACBP22694 351 aa3.32□□□□□ -1.88
CNOT4-202ENST00000356162 CRHBPP24387 322 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms