RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 COTL1Q14019 142 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 SLC25A30Q5SVS4 291 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 LDLRAD3Q86YD5 345 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 SPTSSAQ969W0 71 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 KCNJ15Q99712 375 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 FBXL17Q9UF56 701 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 HSF4Q9ULV5 492 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 RPH3ALQ9UNE2 315 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 PLXND1Q9Y4D7 1925 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 FREM3P0C091 2139 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 IGHV1OR15-9A0A0B4J2B8 117 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 MBTPS2O43462 519 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 PTP4A3O75365 173 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 PNPP00491 289 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 GUSBP08236 651 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 RAB5AP20339 215 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 RPS4XP62701 263 aaKnown RBP12.55□□□□□ -0.4
SREBF1-202ENST00000355815 DCDP81605 110 aaKnown RBP12.55□□□□□ -0.4
SREBF1-202ENST00000355815 SLC17A1Q14916 467 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 IL34Q6ZMJ4 242 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 H1FNTQ75WM6 255 aaPredicted RBP12.55□□□□□ -0.4
SREBF1-202ENST00000355815 OR11G2Q8NGC1 345 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 IL22RA2Q969J5 263 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 AMELYQ99218 206 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 SLC5A6Q9Y289 635 aa12.55□□□□□ -0.4
SREBF1-202ENST00000355815 NUDT19A8MXV4 375 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 CSNK1A1P48729 337 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 DVL1P1P54792 670 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-202ENST00000355815 DCAF7P61962 342 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 HSF1Q00613 529 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 PMS2P11Q13670 270 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 KLF9Q13886 244 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-202ENST00000355815 SPANXN5Q5MJ07 72 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 GLRX5Q86SX6 157 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 FAM234AQ9H0X4 552 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 TAAR5O14804 337 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 GEMIN2O14893 280 aaKnown RBP12.54□□□□□ -0.4
SREBF1-202ENST00000355815 ONECUT2O95948 504 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 RNF224P0DH78 156 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 IL9P15248 144 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 BCKDHBP21953 392 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 CCR5P51681 352 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 PIGPP57054 158 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 FOXF1Q12946 379 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 TMEM128Q5BJH2 165 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 BHLHE23Q8NDY6 225 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 OR4F5Q8NH21 305 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 OR4F4Q96R69 305 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 METTL9Q9H1A3 318 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 RYDENQ9NUL5 291 aaKnown RBP12.54□□□□□ -0.4
SREBF1-202ENST00000355815 PCOLCE2Q9UKZ9 415 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 SRPK3Q9UPE1 567 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 MMACHCQ9Y4U1 282 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 TGFBR3LH3BV60 316 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 CHRM2P08172 466 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 IAPPP10997 89 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 ACKR3P25106 362 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 MESTQ5EB52 335 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 PTPMT1Q8WUK0 201 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-202ENST00000355815 RTN4IP1Q8WWV3 396 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-202ENST00000355815 GPR173Q9NS66 373 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 PLXNA3P51805 1871 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 MTCL1Q9Y4B5 1905 aaKnown RBP12.54□□□□□ -0.4
SREBF1-202ENST00000355815 ZNF320A2RRD8 509 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 ARPC3O15145 178 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 SPINK4O60575 86 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 HEXAP06865 529 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 OR5H8P0DN80 308 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 VSIG10L2P0DP72 767 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 SPINK2P20155 84 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 GSK3AP49840 483 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 RAB1AP62820 205 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 TMEM164Q5U3C3 297 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 RGS7BPQ6MZT1 257 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-202ENST00000355815 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 PHF7Q9BWX1 381 aaPredicted RBP12.54□□□□□ -0.4
SREBF1-202ENST00000355815 SIT1Q9Y3P8 196 aa12.54□□□□□ -0.4
SREBF1-202ENST00000355815 CHD7Q9P2D1 2997 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 C9orf170A2RU37 121 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 IGHG1P01857 330 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 RAC2P15153 192 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 EFNB2P52799 333 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 MFAP5Q13361 173 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 OR13D1Q8NGV5 346 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 MRPS24Q96EL2 167 aaKnown RBP12.53□□□□□ -0.4
SREBF1-202ENST00000355815 ELOVL1Q9BW60 279 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 LAT2Q9GZY6 243 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 UBE2ZQ9H832 354 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-202ENST00000355815 MRPS18AQ9NVS2 196 aaKnown RBP12.53□□□□□ -0.4
SREBF1-202ENST00000355815 MFSD2BA6NFX1 497 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 GABRA4P48169 554 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 PSMB3P49720 205 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 SULT1A1P50225 295 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 PLGLB1Q02325 96 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 BRICD5Q6PL45 260 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 ZNF813Q6ZN06 617 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 NKAIN3Q8N8D7 197 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 EXD3Q8N9H8 876 aa12.53□□□□□ -0.4
SREBF1-202ENST00000355815 BORCS7Q96B45 105 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms