RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 NLKQ9UBE8 527 aa13.75□□□□□ -0.21
PDLIM7-201ENST00000355572 OR52A1Q9UKL2 312 aa13.75□□□□□ -0.21
PDLIM7-201ENST00000355572 RRP15Q9Y3B9 282 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-201ENST00000355572 NBEAL1Q6ZS30 2694 aa13.75□□□□□ -0.21
PDLIM7-201ENST00000355572 A0A1W2PRD5 423 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 A0A1W2PRF3 423 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 A0A1W2PRM7 423 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 OR2AT4A6NND4 320 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 ZNF670-ZNF695F2Z2N8 137 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 RNASEK-C17orf49H0YIS7 233 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 DHRS3O75911 302 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 ATP5HO75947 161 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 RPP14O95059 124 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 LIPFP07098 398 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 GLRA1P23415 457 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 RASSF2P50749 326 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 GNG3P63215 75 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 ZNF85Q03923 595 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 SRSF4Q08170 494 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 KPNB1Q14974 876 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 ZNF829Q3KNS6 432 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 METTL11BQ5VVY1 283 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 HAGHLQ6PII5 290 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 CD177Q8N6Q3 437 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 ZNRF1Q8ND25 227 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 TNFRSF14Q92956 283 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 C12orf43Q96C57 262 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 CENPNQ96H22 339 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 ONECUT1Q9UBC0 465 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 TMEM14AQ9Y6G1 99 aa13.74□□□□□ -0.21
PDLIM7-201ENST00000355572 FAM181BA6NEQ2 426 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 SIGLEC5O15389 551 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 NDUFB3O43676 98 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 ACAA1P09110 424 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 HTR1FP30939 366 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 KIR3DL2P43630 455 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 RIPPLY1Q0D2K3 151 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 SNCBQ16143 134 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 CDONQ4KMG0 1287 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 HCP5Q6MZN7 132 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 C16orf87Q6PH81 154 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 SLC36A1Q7Z2H8 476 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 CATSPERDQ86XM0 798 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 PRSS35Q8N3Z0 413 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 FTMTQ8N4E7 242 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 OR5A2Q8NGI9 324 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 C8orf46Q8TAG6 207 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 H1FXQ92522 213 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 RORBQ92753 470 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 SLC25A28Q96A46 364 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 ZNF747Q9BV97 191 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 UNKLQ9H9P5 680 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 ACOXLQ9NUZ1 547 aa13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 H2AFY2Q9P0M6 372 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-201ENST00000355572 IGKV1-27A0A075B6S5 117 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 PQLC2LA1A4F0 135 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 EI24O14681 340 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ECDO95905 644 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 NRASP01111 189 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 IGHV4-59P01825 116 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ALPLP05186 524 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 FCGR1AP12314 374 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 CCL1P22362 96 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ACTR3P61158 418 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ISL1P61371 349 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 EGR3Q06889 387 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 FOXL1Q12952 345 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ZIK1Q3SY52 487 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 BCL2L15Q5TBC7 163 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 FIP1L1Q6UN15 594 aaKnown RBP13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ACP7Q6ZNF0 438 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 THAP5Q7Z6K1 395 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 CALHM1Q8IU99 346 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 GID4Q8IVV7 300 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 PRRG3Q9BZD7 231 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ZMAT3Q9HA38 289 aaKnown RBP13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ABCB9Q9NP78 766 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 SLC25A10Q9UBX3 287 aaPredicted RBP13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 WARS2Q9UGM6 360 aaKnown RBP13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 ENPP5Q9UJA9 477 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 KPTNQ9Y664 436 aa13.72□□□□□ -0.21
PDLIM7-201ENST00000355572 OR5B21A6NL26 309 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 F8VVB4 439 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 F8VWA3 439 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 ATP6V1B1P15313 513 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 GABRA2P47869 451 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 KRTAP10-3P60369 221 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 ERVFRD-1P60508 538 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 IL13RA1P78552 427 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 PDCD1Q15116 288 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 TP53I3Q53FA7 332 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 ZBTB37Q5TC79 503 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 RNF144BQ7Z419 303 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 ANGPTL5Q86XS5 388 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 RDH10Q8IZV5 341 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 YIPF7Q8N8F6 280 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 POC1AQ8NBT0 407 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 OR10H4Q8NGA5 316 aa13.71□□□□□ -0.21
PDLIM7-201ENST00000355572 TRMT10AQ8TBZ6 339 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms