RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 FLOT2Q14254 428 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CLINT1Q14677 625 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 EXOC3L4Q17RC7 722 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 FAM27D1Q5T7N8 215 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 C11orf71Q6IPW1 123 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 XKRXQ6PP77 449 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 WDR74Q6RFH5 385 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM179Q6ZVK1 233 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 BLIDQ8IZY5 108 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 OR10W1Q8NGF6 305 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 OR8U1Q8NH10 309 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 OR2L2Q8NH16 312 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CAPZA3Q96KX2 299 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 HIST1H4GQ99525 98 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 P2RX4Q99571 388 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 COPS4Q9BT78 406 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 MED10Q9BTT4 135 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 API5Q9BZZ5 524 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 SELENOIQ9C0D9 397 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 Q9H521 79 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 RANBP3Q9H6Z4 567 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ISG20L2Q9H9L3 353 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 RRAGDQ9NQL2 400 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 IMP3Q9NV31 184 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 DPM3Q9P2X0 92 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF629Q9UEG4 869 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 BTNL2Q9UIR0 455 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 OR51B2Q9Y5P1 312 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 WIF1Q9Y5W5 379 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 KALRNO60229 2985 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 NID2Q14112 1375 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 MTUS2Q5JR59 1369 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CEP290O15078 2479 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 A0A0J9YWU9 116 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 C1orf232A0A0U1RR37 186 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 J3QLI3 93 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 LINC01565O15544 149 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 AQP9O43315 295 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 SUPT3HO75486 399 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 LDOC1O95751 146 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 FABP3P05413 133 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CT45A6P0DMU7 189 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CT45A5P0DMU8 189 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CT45A7P0DMV0 189 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 IGFBP3P17936 291 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 PSMB5P28074 263 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 GRPRP30550 384 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 KDELR2P33947 212 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 TGFBR1P36897 503 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CTRLP40313 264 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 INPP1P49441 399 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 RAP1GDS1P52306 607 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 STX17P56962 302 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 RPS23P62266 143 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CYP24A1Q07973 514 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 Q1RN00 199 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CT45A1Q5HYN5 189 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CCNJQ5T5M9 372 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 FBXW9Q5XUX1 488 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ZCCHC24Q8N2G6 241 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 OR2L5Q8NG80 312 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 OR2A1Q8NGT9 310 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CT45A3Q8NHU0 189 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 NEIL3Q8TAT5 605 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ZBED3Q96IU2 234 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ARL5BQ96KC2 179 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 SPZ1Q9BXG8 430 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 NKIRAS1Q9NYS0 192 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CLEC4EQ9ULY5 219 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 NEU3Q9UQ49 428 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF257Q9Y2Q1 563 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 SNX24Q9Y343 169 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ROCK1Q13464 1354 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 MAST2Q6P0Q8 1798 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 SPG11Q96JI7 2443 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 SEC14L6B5MCN3 397 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 C11orf94C9JXX5 98 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CTNSO60931 367 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 RHOCP08134 193 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 H2AFZP0C0S5 128 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 IGHV3-43DP0DP04 118 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 THRAP10827 490 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ICAM2P13598 275 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 MYCNOSP40205 109 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 PPICP45877 212 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF121P58317 390 aaPredicted RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 TAS2R46P59540 309 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 ESRRGP62508 458 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 DYNLL1P63167 89 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 IL5RAQ01344 420 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 PRKCDQ05655 676 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 BNIP2Q12982 314 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 LPAL2Q16609 132 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 OR10J3Q5JRS4 329 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 FBXW12Q6X9E4 464 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 Q6ZT83 130 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 TRMT10CQ7L0Y3 403 aaKnown RBP1.17□□□□□ -2.22
BRCA1-202ENST00000354071 CADM2Q8N3J6 435 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 C11orf42Q8N5U0 333 aa1.17□□□□□ -2.22
BRCA1-202ENST00000354071 OR4K2Q8NGD2 314 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms