RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 PMS2P1A4D2B8 440 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 CST2P09228 141 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 PATE4P0C8F1 98 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 TMEM225BP0DP42 221 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 ACP1P24666 158 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 PRSS12P56730 875 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 OVCH2Q7RTZ1 564 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 C6orf201Q7Z4U5 140 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 HSD17B13Q7Z5P4 300 aaPredicted RBP19.01■□□□□ 0.63
SHMT1-202ENST00000352886 OR10D3Q8NH80 312 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 OR1F12Q8NHA8 337 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 NMES1Q9C002 83 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 DEPPQ9NTK1 212 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 GPR160Q9UJ42 338 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 OSGIN2Q9Y236 505 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 CSAG2Q9Y5P2 127 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 KRBOX1C9JBD0 128 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 TRIM77I1YAP6 450 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 F10P00742 488 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 SUPT4H1P63272 117 aaKnown RBP19.01■□□□□ 0.63
SHMT1-202ENST00000352886 TCEAL6Q6IPX3 200 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 C6orf15Q6UXA7 325 aaPredicted RBP19.01■□□□□ 0.63
SHMT1-202ENST00000352886 OR5AP2Q8NGF4 316 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 TCEAL3Q969E4 200 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 CDC6Q99741 560 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 PPA2Q9H2U2 334 aa19.01■□□□□ 0.63
SHMT1-202ENST00000352886 PCSK5Q92824 1860 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 ADAP1O75689 374 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 ZNF32P17041 273 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 CHRFAM7AQ494W8 412 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 CCDC157Q569K6 752 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 AKR7LQ8NHP1 331 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 CPT1CQ8TCG5 803 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 NECAB3Q96P71 396 aaPredicted RBP19■□□□□ 0.63
SHMT1-202ENST00000352886 AIFM2Q9BRQ8 373 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 LCATP04180 440 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 RGS19P49795 217 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 SCRN3Q0VDG4 424 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 ARL6IP1Q15041 203 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 NKAPLQ5M9Q1 402 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 ZC3HAV1Q7Z2W4 902 aaKnown RBP19■□□□□ 0.63
SHMT1-202ENST00000352886 ADGRG7Q96K78 797 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 PLEKHJ1Q9NW61 149 aa19■□□□□ 0.63
SHMT1-202ENST00000352886 MCTS1Q9ULC4 181 aaKnown RBP19■□□□□ 0.63
SHMT1-202ENST00000352886 FAM230AA0A1W2PPH8 454 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 F5H0A9 414 aaPredicted RBP18.99■□□□□ 0.63
SHMT1-202ENST00000352886 ANGPTL7O43827 346 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 GLRA1P23415 457 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 SSPNQ14714 243 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 H3F3CQ6NXT2 135 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 SULF2Q8IWU5 870 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 OR2V1Q8NHB1 315 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 RHBDD1Q8TEB9 315 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 DCUN1D4Q92564 292 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 SPSB1Q96BD6 273 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 Q96M66 194 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 FBXO9Q9UK97 447 aaPredicted RBP18.99■□□□□ 0.63
SHMT1-202ENST00000352886 DHRS7CA6NNS2 312 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 PLATP00750 562 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 PGAM2P15259 253 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 GDF1P27539 372 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 HTR5AP47898 357 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 CYB561P49447 251 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 CLDN15P56746 228 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 CYCSP99999 105 aaKnown RBP18.99■□□□□ 0.63
SHMT1-202ENST00000352886 ANKRD55Q3KP44 614 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 ABLIM2Q6H8Q1 611 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 EIF4E3Q8N5X7 224 aaKnown RBP18.99■□□□□ 0.63
SHMT1-202ENST00000352886 FOXB1Q99853 325 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 RAB18Q9NP72 206 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 P4HTMQ9NXG6 502 aa18.99■□□□□ 0.63
SHMT1-202ENST00000352886 IGKV1D-8A0A087WSZ0 117 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 PINLYPA6NC86 204 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 MPTX1A8MV57 137 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 SPRY1O43609 319 aaPredicted RBP18.98■□□□□ 0.63
SHMT1-202ENST00000352886 SERPINA5P05154 406 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 PHYHIPLQ96FC7 376 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 A0A1B0GW55 424 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 DUX4L2P0CJ85 424 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 DUX4L3P0CJ86 424 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 DUX4L4P0CJ87 422 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 DUX4L5P0CJ88 424 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 DUX4L6P0CJ89 424 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 DUX4L7P0CJ90 424 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 PSG4Q00888 419 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 CEACAM16Q2WEN9 425 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 UNQ6126/PRO20091Q6UXV3 157 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 MOB3CQ70IA8 216 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 HDHD3Q9BSH5 251 aaPredicted RBP18.98■□□□□ 0.63
SHMT1-202ENST00000352886 RNF126Q9BV68 326 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 DUX4Q9UBX2 424 aa18.98■□□□□ 0.63
SHMT1-202ENST00000352886 IGKV1-27A0A075B6S5 117 aa18.97■□□□□ 0.63
SHMT1-202ENST00000352886 A0A0B4J2A0 478 aa18.97■□□□□ 0.63
SHMT1-202ENST00000352886 OR6C6A6NF89 314 aa18.97■□□□□ 0.63
SHMT1-202ENST00000352886 CSTBP04080 98 aaKnown RBP18.97■□□□□ 0.63
SHMT1-202ENST00000352886 SERPINA7P05543 415 aa18.97■□□□□ 0.63
SHMT1-202ENST00000352886 HOXD4P09016 255 aaPredicted RBP18.97■□□□□ 0.63
SHMT1-202ENST00000352886 RTL6Q6ICC9 239 aa18.97■□□□□ 0.63
SHMT1-202ENST00000352886 TMEM105Q8N8V8 129 aa18.97■□□□□ 0.63
SHMT1-202ENST00000352886 METTL9Q9H1A3 318 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms