RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 BOCQ9BWV1 1114 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 BCO2Q9BYV7 579 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM134Q9H6X4 195 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 DYNLRB1Q9NP97 96 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 TDP1Q9NUW8 608 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 GTF3C1Q12789 2109 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 LINC01387J3KSC0 135 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 RPIAP49247 311 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 OR4X2Q8NGF9 303 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 SCN2AQ99250 2005 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 LTBQ06643 244 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 C16orf82Q7Z2V1 217 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 NUS1Q96E22 293 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ATOH8Q96SQ7 321 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 SLC7A7Q9UM01 511 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF257Q9Y2Q1 563 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ZDBF2Q9HCK1 2354 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 FCN1O00602 326 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 HLA-DQA1P01909 254 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 RNF149Q8NC42 400 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 PTPN18Q99952 460 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ARHGAP9Q9BRR9 750 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 NDRG2Q9UN36 371 aaKnown RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 IGHV1-69-2A0A0G2JMI3 117 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 H0Y980 276 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 CBX7O95931 251 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 IL4P05112 153 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 GSTP1P09211 210 aaKnown RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 IL11P20809 199 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 DNM1P46Q6ZS02 220 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 OR10AG1Q8NH19 301 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 HRASLSQ9HDD0 168 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 C19orf25Q9UFG5 118 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 CKAP5Q14008 2032 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 NME4O00746 187 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ADAM20O43506 726 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 TOMM40O96008 361 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 UBE2L3P68036 154 aaKnown RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 CIRBPQ14011 172 aaKnown RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 HERPUD1Q15011 391 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ARSJQ5FYB0 599 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 LYG2Q86SG7 212 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF611Q8N823 705 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 OR1N1Q8NGS0 311 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 OR52P1PQ8NH57 321 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 STRADBQ9C0K7 418 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 SLC45A2Q9UMX9 530 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 IGHV2OR16-5A0A0B4J2B6 119 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 IFITM10A6NMD0 228 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF716A6NP11 495 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF735P0CB33 412 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 FOXK2Q01167 660 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 LY6DQ14210 128 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SBSNQ6UWP8 590 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ACOT4Q8N9L9 421 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR51H1Q8NH63 302 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 LIPHQ8WWY8 451 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H2BAQ96A08 127 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 MMACHCQ9Y4U1 282 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ADGRB1O14514 1584 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TRAV18A0A075B6X5 111 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C5orf49A4QMS7 147 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 GPR182O15218 404 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 AVPR1BP47901 424 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 RNASEKQ6P5S7 137 aaKnown RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 TPRG1Q6ZUI0 275 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SPNS2Q8IVW8 549 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 NANOS1Q8WY41 292 aaKnown RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SDHCQ99643 169 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 MYH2Q9UKX2 1941 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 FXYD1O00168 92 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 KIR2DL2P43627 348 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 GPR4P46093 362 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 UCP2P55851 309 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 RHOGP84095 191 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 MEF2CQ06413 473 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 LDLRAD2Q5SZI1 272 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 PRDM13Q9H4Q3 707 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C7orf77A4D0Y5 90 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZBTB42B2RXF5 422 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 E9PQ18 207 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CSO75390 466 aaKnown RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 DHRS3O75911 302 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR7C1O76099 320 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 PRR35P0CG20 571 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 CD200P41217 278 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 C2CD4AQ8NCU7 369 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 SIGLEC12Q96PQ1 595 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR5V1Q9UGF6 321 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZAR1LA6NP61 321 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 GEMIN2O14893 280 aaKnown RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 XRCC3O43542 346 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 EIF4E2O60573 245 aaKnown RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 DDAH2O95865 285 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OPRD1P41143 372 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 MEF2AQ02078 507 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-202ENST00000344113 OR1K1Q8NGR3 316 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF563Q8TA94 476 aa3.39□□□□□ -1.87
SYNE2-202ENST00000344113 NUBPLQ8TB37 319 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms