RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 GLRX5Q86SX6 157 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 TMEM123Q8N131 208 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 RAB40CQ96S21 281 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 RIMS4Q9H426 269 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 NAA60Q9H7X0 242 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 A6NLC8 198 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SCGB2A1O75556 95 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 TOX4O94842 621 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 G0S2P27469 103 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 LSM11P83369 360 aaKnown RBP eCLIP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 AARDQ4LEZ3 155 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ABLIM2Q6H8Q1 611 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 CLEC18BQ6UXF7 455 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 TMEM104Q8NE00 496 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 OR4C3Q8NH37 302 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 LHX4Q969G2 390 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 DAZAP1Q96EP5 407 aaKnown RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 HHIPQ96QV1 700 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 NRIP2Q9BQI9 281 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SCRG1O75711 98 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SLC37A1P57057 533 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 TGFBR3Q03167 851 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 FOXO1Q12778 655 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SHBQ15464 509 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 TMEM215Q68D42 235 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ALKBH2Q6NS38 261 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 PET117Q6UWS5 81 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ANKRD33Q7Z3H0 272 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ADAMTS17Q8TE56 1095 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 RPUSD4Q96CM3 377 aaKnown RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SLX1AQ9BQ83 275 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 KCNK7Q9Y2U2 307 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 CARHSP1Q9Y2V2 147 aaKnown RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 AMDHD2Q9Y303 409 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 AUP1Q9Y679 476 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SIRT4Q9Y6E7 314 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 COL4A5P29400 1685 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 CXorf65A6NEN9 183 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 FAM74A7A6NL05 159 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 H3BQ15 152 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 FBP1P09467 338 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 OR3A4PP47883 348 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 KCNAB1Q14722 419 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 CMBLQ96DG6 245 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 MYOZ1Q9NP98 299 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 POLDIP2Q9Y2S7 368 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF320A2RRD8 509 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ANKUB1A6NFN9 424 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 HOXC4P09017 264 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 IFI6P09912 130 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF439Q8NDP4 499 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 OR2AE1Q8NHA4 323 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF845Q96IR2 970 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 MOGAT1Q96PD6 335 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ADAT1Q9BUB4 502 aaKnown RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 HEXAP06865 529 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 POU3F2P20265 443 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 DEFB119Q8N690 84 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 OR2A5Q96R48 311 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 GGACTQ9BVM4 153 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 A0A1B0GTH9 108 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 PLPP3O14495 311 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 F12P00748 615 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SLC36A1Q7Z2H8 476 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 TIPARPQ7Z3E1 657 aaKnown RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 OR1N1Q8NGS0 311 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SARGQ9BW04 601 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 PECRQ9BY49 303 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 NAT8Q9UHE5 227 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 KLK13Q9UKR3 277 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 NOSIPQ9Y314 301 aaKnown RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 C4orf47A7E2U8 309 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 HAAOP46952 286 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 CRYBA2P53672 197 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 CEBPEQ15744 281 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 UBE3DQ7Z6J8 389 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 MS4A3Q96HJ5 214 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 VPS25Q9BRG1 176 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF331Q9NQX6 463 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 TIMM10BQ9Y5J6 103 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 LIPGQ9Y5X9 500 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 DEGS1O15121 323 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ALOX12BO75342 701 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 RPLP1P05386 114 aaKnown RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 TLE1Q04724 770 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SRYQ05066 204 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 DCAF12L2Q5VW00 463 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 VSIG4Q9Y279 399 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 GCGP01275 180 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 FUT5Q11128 374 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 CLN3Q13286 438 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 COTL1Q14019 142 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SMAD2Q15796 467 aaKnown RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 OR4C5Q8NGB2 326 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SNX22Q96L94 193 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ATP5SQ99766 215 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 FAAP24Q9BTP7 215 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 FLRT3Q9NZU0 649 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 MMP24Q9Y5R2 645 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms