RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 A0A1W2PPC1 479 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 IFI6P09912 130 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 EDDM3AQ14507 147 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 CST9LP1Q5W188 147 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 FAHD2BQ6P2I3 314 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 LCN15Q6UWW0 184 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 LSRQ86X29 649 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 ZNF573Q86YE8 665 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 CLRN3Q8NCR9 226 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 OR4D10Q8NGI6 311 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 FAHD2AQ96GK7 314 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 LINC00052Q96N35 136 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 RTL8AQ9BWD3 113 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 TMEM74BQ9NUR3 256 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 AK3Q9UIJ7 227 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 POLDIP2Q9Y2S7 368 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 MTCH2Q9Y6C9 303 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 ZNF732B4DXR9 585 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 H3BP45 60 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 CST7O76096 145 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 PRSS54Q6PEW0 395 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 CXorf58Q96LI9 332 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 RIMS4Q9H426 269 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 FN3KRPQ9HA64 309 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 B3GAT1Q9P2W7 334 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 SIRPB1O00241 398 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ADRA2AP08913 450 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 VSIG10L2P0DP72 767 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 EDDM3BP56851 147 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 C19orf57Q0VDD7 668 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 KIAA0141Q14154 515 aaPredicted RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 HAGHQ16775 308 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 TBC1D28Q2M2D7 210 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 JMJD6Q6NYC1 403 aaPredicted RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 BRICD5Q6PL45 260 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 UBALD2Q8IYN6 164 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ZDHHC23Q8IYP9 409 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 OR11H4Q8NGC9 324 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ADAT3Q96EY9 351 aaPredicted RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 PHYHIPLQ96FC7 376 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ADAM19Q9H013 955 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ZFP64Q9NPA5 681 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 SPTBN1Q01082 2364 aaKnown RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 MIA3Q5JRA6 1907 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 MED12Q93074 2177 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 IGKV1D-42A0A075B6H8 117 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 PTGER4P35408 488 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 RAB1AP62820 205 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 RPP30P78346 268 aaKnown RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 VASH2Q86V25 355 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 TMEM123Q8N131 208 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 STRAPQ9Y3F4 350 aaKnown RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 HLA-HP01893 362 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 TTRP02766 147 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 CCL11P51671 97 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 SPANXN5Q5MJ07 72 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 RPUSD3Q6P087 351 aaKnown RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 CLEC18BQ6UXF7 455 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 UNQ9370/PRO34162Q6UXP9 181 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 APOBEC3DQ96AK3 386 aaPredicted RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 PIK3IP1Q96FE7 263 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 MRPS18BQ9Y676 258 aaKnown RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 TDRD15B5MCY1 1934 aaKnown RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 RAB19A4D1S5 217 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 SSSCA1O60232 199 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ARR3P36575 388 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ELLP55199 621 aaPredicted RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 ROM1Q03395 351 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 FAM96BQ9Y3D0 163 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ARGFXA6NJG6 315 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 PDCD6O75340 191 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 GLAP06280 429 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 CCL4P13236 92 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 OR2B8PP59922 312 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 LSM6P62312 80 aaKnown RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 BAXQ07812 192 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 TUSC1Q2TAM9 212 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 PABPC1L2AQ5JQF8 200 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 VWCEQ96DN2 955 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 GPR137Q96N19 417 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 BRCA1P38398 1863 aaKnown RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 RNASEK-C17orf49H0YIS7 233 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 SPINT2O43291 252 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 B3GALNT1O75752 331 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 IGF2P01344 180 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 FAM157BP0CG42 384 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 RAC3P60763 192 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 DCAF12L2Q5VW00 463 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 GGNBP1Q5YKI7 109 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 RPL7L1Q6DKI1 246 aaKnown RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 WDR74Q6RFH5 385 aaPredicted RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 THNSL2Q86YJ6 484 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 BPIFCQ8NFQ6 507 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 MITD1Q8WV92 249 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ZNF501Q96CX3 271 aaPredicted RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 PRR13Q9NZ81 148 aa6.37□□□□□ -1.39
VCAN-202ENST00000342785 ZNF107Q9UII5 783 aaPredicted RBP6.37□□□□□ -1.39
VCAN-202ENST00000342785 LRP5LA4QPB2 252 aa6.36□□□□□ -1.39
VCAN-202ENST00000342785 CFDP00746 253 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms