RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-201ENST00000340074 SLC1A7O00341 560 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 AKR7A2O43488 359 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 CRLF1O75462 422 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 RHBDL1O75783 438 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 ZFP36P26651 326 aaKnown RBP12.74□□□□□ -0.37
UBE3B-201ENST00000340074 GMFBP60983 142 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 KCNJ8Q15842 424 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 CCDC58Q4VC31 144 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 TEX36Q5VZQ5 186 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 HAGHLQ6PII5 290 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-201ENST00000340074 FAM90A1Q86YD7 464 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 OR13C3Q8NGS6 347 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 OR10Z1Q8NGY1 313 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 OR52N1Q8NH53 320 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 TRMT10AQ8TBZ6 339 aaKnown RBP12.74□□□□□ -0.37
UBE3B-201ENST00000340074 NPRL2Q8WTW4 380 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 SEH1LQ96EE3 360 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 COMMD4Q9H0A8 199 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
UBE3B-201ENST00000340074 FAM230AA0A1W2PPH8 454 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 PTGES3LE9PB15 166 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 PHF1O43189 567 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-201ENST00000340074 FOXH1O75593 365 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 GATBO75879 557 aaKnown RBP12.73□□□□□ -0.37
UBE3B-201ENST00000340074 LALBAP00709 142 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 SERPINA3P01011 423 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 GYPAP02724 150 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 ZNF20P17024 532 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 HAAOP46952 286 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 CDK5R1Q15078 307 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 MICBQ29980 383 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 CR1LQ2VPA4 569 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 ESCO2Q56NI9 601 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 FAM120AOSQ5T036 256 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 RPL22L1Q6P5R6 122 aaKnown RBP12.73□□□□□ -0.37
UBE3B-201ENST00000340074 IL17RELQ6ZVW7 336 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 ZNF573Q86YE8 665 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 ZNF485Q8NCK3 441 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 OR8B3Q8NGG8 313 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 RPS4Y2Q8TD47 263 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 PP6455Q8WZ26 134 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 AQP3Q92482 292 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 NEIL1Q96FI4 390 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-201ENST00000340074 OR8B2Q96RD0 313 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 SSBP3Q9BWW4 388 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-201ENST00000340074 WDR13Q9H1Z4 485 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 TRIM36Q9NQ86 728 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 BABAM2Q9NXR7 383 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 SCN3BQ9NY72 215 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 SLC7A11Q9UPY5 501 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 LRCH1Q9Y2L9 728 aa12.73□□□□□ -0.37
UBE3B-201ENST00000340074 SIRT4Q9Y6E7 314 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-201ENST00000340074 KIAA1324LA8MWY0 1029 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-201ENST00000340074 A8MXK9 166 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 TNFRSF13BO14836 293 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-201ENST00000340074 CDK1P06493 297 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 MUC1P15941 1255 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-201ENST00000340074 RIPPLY3P57055 190 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 NLRC3Q7RTR2 1065 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 CALHM1Q8IU99 346 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 ZNF671Q8TAW3 534 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 SGCDQ92629 289 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 CNBD2Q96M20 576 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 TECTBQ96PL2 329 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 SHARPINQ9H0F6 387 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 PAK1IP1Q9NWT1 392 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-201ENST00000340074 CDC42EP3Q9UKI2 254 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 RAB26Q9ULW5 256 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 PCDHGB5Q9Y5G0 923 aa12.72□□□□□ -0.37
UBE3B-201ENST00000340074 IGKV1-9A0A0C4DH69 117 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 MYL12BO14950 172 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 OGG1O15527 345 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 NDUFA2O43678 99 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 SYNGR1O43759 233 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 RPSAP08865 295 aaKnown RBP12.71□□□□□ -0.37
UBE3B-201ENST00000340074 GLRA1P23415 457 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 CPT2P23786 658 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 PITPNBP48739 271 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 FUT6P51993 359 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 GNB2P62879 340 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 CNN3Q15417 329 aaKnown RBP12.71□□□□□ -0.37
UBE3B-201ENST00000340074 CHRFAM7AQ494W8 412 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 FAHD2BQ6P2I3 314 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-201ENST00000340074 UTS2BQ765I0 119 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 ANGPTL5Q86XS5 388 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 ZFP41Q8N8Y5 198 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.37
UBE3B-201ENST00000340074 RGP1Q92546 391 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-201ENST00000340074 FAHD2AQ96GK7 314 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 BEX2Q9BXY8 128 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 SNTG1Q9NSN8 517 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 CTSZQ9UBR2 303 aa12.71□□□□□ -0.37
UBE3B-201ENST00000340074 IGKV1-27A0A075B6S5 117 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 A0A0G2JMP0 313 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 A0A0X1KG70 313 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 TRAPPC2LH3BP13 241 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 J3QT63 122 aa12.71□□□□□ -0.38
UBE3B-201ENST00000340074 ADAM20O43506 726 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms