RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ERGIC1Q969X5 290 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 ADAM19Q9H013 955 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 NELFAQ9H3P2 528 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 CELSR3Q9NYQ7 3312 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 CNOT4O95628 575 aaKnown RBP12.49□□□□□ -0.41
PCDH8-201ENST00000338862 DDAH2O95865 285 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 DRD1P21728 446 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 CSNK1A1P48729 337 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 SLC22A25Q6T423 547 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 OR2G3Q8NGZ4 309 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 SLC22A8Q8TCC7 542 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 BORCS8Q96FH0 119 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 BARX1Q9HBU1 254 aaPredicted RBP12.49□□□□□ -0.41
PCDH8-201ENST00000338862 ZNF407Q9C0G0 2248 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 C5orf63A6NC05 138 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 RBMXL2O75526 392 aaKnown RBP12.49□□□□□ -0.41
PCDH8-201ENST00000338862 IGHV4-34P06331 123 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 SCAND1P57086 179 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 EIF4E3Q8N5X7 224 aaKnown RBP12.49□□□□□ -0.41
PCDH8-201ENST00000338862 PRO1933Q9H354 126 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 ZNF319Q9P2F9 582 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 WNT16Q9UBV4 365 aa12.49□□□□□ -0.41
PCDH8-201ENST00000338862 FBP1P09467 338 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 DTWD2Q8NBA8 298 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 OR11L1Q8NGX0 322 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 IL1F10Q8WWZ1 152 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 ASB10Q8WXI3 467 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 GABRG3Q99928 467 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 PBDC1Q9BVG4 233 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 MEX3AA1L020 520 aaKnown RBP12.48□□□□□ -0.41
PCDH8-201ENST00000338862 FAM24AA6NFZ4 105 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 ZFP92A6NM28 416 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 TMEM50BP56557 158 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 ROM1Q03395 351 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 HOGA1Q86XE5 327 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 WDFY1Q8IWB7 410 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 SLC30A7Q8NEW0 376 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 OR1N1Q8NGS0 311 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 ZNF519Q8TB69 540 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 BSCL2Q96G97 398 aaPredicted RBP12.48□□□□□ -0.41
PCDH8-201ENST00000338862 OBP2AQ9NY56 170 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 GPR132Q9UNW8 380 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 MASP2O00187 686 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 DUX1O43812 170 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 JTBO76095 146 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 IFNA17P01571 189 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 IL34Q6ZMJ4 242 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 ZNF695Q8IW36 515 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 GNRHR2Q96P88 292 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 RAB18Q9NP72 206 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 KPTNQ9Y664 436 aa12.48□□□□□ -0.41
PCDH8-201ENST00000338862 WIPF3A6NGB9 483 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 EPOPA6NHQ4 379 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 SSSCA1O60232 199 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 ARRDC1Q8N5I2 433 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 OR6C1Q96RD1 312 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 SLC2A8Q9NY64 477 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 HS3ST3A1Q9Y663 406 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 KIAA2026Q5HYC2 2103 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 DXOO77932 396 aaKnown RBP12.47□□□□□ -0.41
PCDH8-201ENST00000338862 GSK3AP49840 483 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 RHEBQ15382 184 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 TMEM268Q5VZI3 342 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 PLXDC1Q8IUK5 500 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 RNF133Q8WVZ7 376 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 RARRES2Q99969 163 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 SUCNR1Q9BXA5 334 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 NMES1Q9C002 83 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 CFAP54Q96N23 3096 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 A0A0A6YYD4 124 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 DHRS7CA6NNS2 312 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 ZNF724A8MTY0 619 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 CST4P01036 141 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 HLA-HP01893 362 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 FPR2P25090 351 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 DVL1P1P54792 670 aaPredicted RBP12.47□□□□□ -0.41
PCDH8-201ENST00000338862 DCAF7P61962 342 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 NECAP1Q8NC96 275 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 EMG1Q92979 244 aaKnown RBP12.47□□□□□ -0.41
PCDH8-201ENST00000338862 ADIPOR1Q96A54 375 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 TMEM230Q96A57 120 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 SCARF2Q96GP6 870 aaPredicted RBP12.47□□□□□ -0.41
PCDH8-201ENST00000338862 PAPOLGQ9BWT3 736 aaKnown RBP12.47□□□□□ -0.41
PCDH8-201ENST00000338862 ULBP2Q9BZM5 246 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 SLC26A1Q9H2B4 701 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 LMAN1LQ9HAT1 526 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 R4GN57 208 aa12.47□□□□□ -0.41
PCDH8-201ENST00000338862 HPNP05981 417 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 PTGER4P35408 488 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 PPP1CCP36873 323 aaKnown RBP12.46□□□□□ -0.41
PCDH8-201ENST00000338862 MECP2P51608 486 aaKnown RBP12.46□□□□□ -0.41
PCDH8-201ENST00000338862 SRYQ05066 204 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 SGCZQ96LD1 299 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 LANCL2Q9NS86 450 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 HMGB3O15347 200 aaKnown RBP12.46□□□□□ -0.41
PCDH8-201ENST00000338862 AFF3P51826 1226 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms