RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 BTNL3Q6UXE8 466 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 RDH10Q8IZV5 341 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 ACBD7Q8N6N7 88 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 OR5T2Q8NGG2 359 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 OR2G2Q8NGZ5 317 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 UPRTQ96BW1 309 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 C12orf43Q96C57 262 aaKnown RBP12.65□□□□□ -0.38
PRKN-201ENST00000338468 TECTBQ96PL2 329 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 SLC6A7Q99884 636 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 MRI1Q9BV20 369 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 SNTG1Q9NSN8 517 aa12.65□□□□□ -0.38
PRKN-201ENST00000338468 PQLC2LA1A4F0 135 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 CLIC3O95833 236 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 IGHA1P01876 353 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 PPIAL4GP0DN37 164 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 IGHV4-38-2P0DP08 117 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 TGM4P49221 684 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 SMN1Q16637 294 aaKnown RBP12.64□□□□□ -0.39
PRKN-201ENST00000338468 HAGHLQ6PII5 290 aaPredicted RBP12.64□□□□□ -0.39
PRKN-201ENST00000338468 FAM220AQ7Z4H9 259 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 KCTD20Q7Z5Y7 419 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 FAM216BQ8N7L0 139 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 C22orf15Q8WYQ4 148 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 PELI1Q96FA3 418 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 MRPS18AQ9NVS2 196 aaKnown RBP12.64□□□□□ -0.39
PRKN-201ENST00000338468 FRRS1LQ9P0K9 344 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 ZNF69Q9UC07 566 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 PCDHGB1Q9Y5G3 927 aa12.64□□□□□ -0.39
PRKN-201ENST00000338468 TENM1Q9UKZ4 2725 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 A0A0A6YYJ9 748 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 A0A1B0GVI7 797 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 LOC107986453A0A1B0GWG9 222 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 SNTNA6NMZ2 147 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 SYT7O43581 403 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 SYNGR1O43759 233 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 ENSAO43768 121 aaKnown RBP12.63□□□□□ -0.39
PRKN-201ENST00000338468 SELLP14151 372 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 CFPP27918 469 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 FGF12P61328 243 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 SCGB2A2Q13296 93 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 GALEQ14376 348 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 UBE2V2Q15819 145 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 ARMCX4Q5H9R4 360 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 ZNF691Q5VV52 312 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 ZNF788Q6ZQV5 615 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 USP43Q70EL4 1123 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 BTN2A1Q7KYR7 527 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 LHFPL3Q86UP9 236 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 BCL6BQ8N143 479 aaPredicted RBP12.63□□□□□ -0.39
PRKN-201ENST00000338468 OR52I1Q8NGK6 324 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 ANGPTL6Q8NI99 470 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 C4orf36Q96KX1 117 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 ZNF488Q96MN9 340 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 Q96MT0 163 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 ISG20L2Q9H9L3 353 aaKnown RBP12.63□□□□□ -0.39
PRKN-201ENST00000338468 ZNF222Q9UK12 451 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 NUP50Q9UKX7 468 aa12.63□□□□□ -0.39
PRKN-201ENST00000338468 SOX21Q9Y651 276 aaPredicted RBP12.63□□□□□ -0.39
PRKN-201ENST00000338468 IGKV1D-17A0A075B6S4 117 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 IGHV3OR16-10A0A075B7F0 116 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 ANKRD61A6NGH8 418 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 J3QLW9 94 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 PLATP00750 562 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 UBCP0CG48 685 aaKnown RBP12.62□□□□□ -0.39
PRKN-201ENST00000338468 MMP9P14780 707 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 ZNF19P17023 458 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 HILS1P60008 231 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 ADARB1P78563 741 aaKnown RBP12.62□□□□□ -0.39
PRKN-201ENST00000338468 RAB40BQ12829 278 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 CD276Q5ZPR3 534 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 CALHM1Q8IU99 346 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 PACRGLQ8N7B6 248 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.62□□□□□ -0.39
PRKN-201ENST00000338468 ZNF555Q8NEP9 628 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 OR10AC1Q8NH08 325 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 ST8SIA4Q92187 359 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 GAFA1Q96PS6 74 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 ALG8Q9BVK2 526 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 DNTTIP1Q9H147 329 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 ESM1Q9NQ30 184 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 ERVK13-1Q9NX77 482 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 NLKQ9UBE8 527 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 DNAJB11Q9UBS4 358 aa12.62□□□□□ -0.39
PRKN-201ENST00000338468 IGKV1-27A0A075B6S5 117 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 OR4C45A6NMZ5 311 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 E9PI62 339 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 J3QT63 122 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 CASQ2O14958 399 aaPredicted RBP12.61□□□□□ -0.39
PRKN-201ENST00000338468 FADS2O95864 444 aaKnown RBP12.61□□□□□ -0.39
PRKN-201ENST00000338468 ISG15P05161 165 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 SFTPBP07988 381 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 PGA5P0DJD9 388 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 PSG2P11465 335 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 GLRA1P23415 457 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 MPZP25189 248 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 HAAOP46952 286 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 CCR9P51686 369 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 IKZF1Q13422 519 aa12.61□□□□□ -0.39
PRKN-201ENST00000338468 DGUOKQ16854 277 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms