RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 LHX6Q9UPM6 363 aa12.96□□□□□ -0.34
UBA1-201ENST00000335972 F12P00748 615 aaPredicted RBP12.95□□□□□ -0.34
UBA1-201ENST00000335972 HTR5AP47898 357 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 EXT1Q16394 746 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 HES7Q9BYE0 225 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 SMIM3Q9BZL3 60 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 ZC4H2Q9NQZ6 224 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 DSPP15924 2871 aaKnown RBP12.95□□□□□ -0.34
UBA1-201ENST00000335972 SFT2D2O95562 160 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 P04436 131 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 OR5AP2Q8NGF4 316 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 SSC4DQ8WTU2 575 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 PARP12Q9H0J9 701 aaKnown RBP12.95□□□□□ -0.34
UBA1-201ENST00000335972 NXT1Q9UKK6 140 aaKnown RBP12.95□□□□□ -0.34
UBA1-201ENST00000335972 LAMTOR5O43504 91 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 SCGB1D2O95969 90 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 CEACAM16Q2WEN9 425 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 AAED1Q7RTV5 226 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 TIPARPQ7Z3E1 657 aaKnown RBP12.95□□□□□ -0.34
UBA1-201ENST00000335972 CHST5Q9GZS9 411 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 LIME1Q9H400 295 aa12.95□□□□□ -0.34
UBA1-201ENST00000335972 BARX1Q9HBU1 254 aaPredicted RBP12.95□□□□□ -0.34
UBA1-201ENST00000335972 BDP1A6H8Y1 2624 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 A0A096LPE4 126 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 A0A1W2PPZ6 126 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 FAM74A7A6NL05 159 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 EIF1BO60739 113 aaKnown RBP12.94□□□□□ -0.34
UBA1-201ENST00000335972 CBR3O75828 277 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 PRF1P14222 555 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 CNR1P21554 472 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 PTGER4P35408 488 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 RAC1P63000 192 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 RSU1Q15404 277 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 FAM74A3Q4VXF1 159 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 OVCH2Q7RTZ1 564 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 SEMA6DQ8NFY4 1073 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 SPTSSAQ969W0 71 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 LRRC46Q96FV0 321 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 SLC25A32Q9H2D1 315 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 C12orf4Q9NQ89 552 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 FBLN5Q9UBX5 448 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 FOXD3Q9UJU5 478 aaPredicted RBP12.94□□□□□ -0.34
UBA1-201ENST00000335972 MED13Q9UHV7 2174 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 DBX1A6NMT0 343 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 SCGNO76038 276 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 ONECUT2O95948 504 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 CSTBP04080 98 aaKnown RBP12.94□□□□□ -0.34
UBA1-201ENST00000335972 GDF1P27539 372 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 THBS4P35443 961 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 C10orf128Q5T292 105 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 ZNF585AQ6P3V2 769 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 PPP1R32Q7Z5V6 425 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 OR10D3Q8NH80 312 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 HAS2Q92819 552 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 NECAB3Q96P71 396 aaPredicted RBP12.94□□□□□ -0.34
UBA1-201ENST00000335972 OCSTAMPQ9BR26 566 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 R4GN57 208 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 KRBOX1C9JBD0 128 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 CELA3AP09093 270 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 RCC1P18754 421 aaPredicted RBP12.94□□□□□ -0.34
UBA1-201ENST00000335972 NOVA1P51513 510 aaKnown RBP12.94□□□□□ -0.34
UBA1-201ENST00000335972 CLDN15P56746 228 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 MC2RQ01718 297 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 PIGCQ92535 297 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 V9GYS6 101 aa12.94□□□□□ -0.34
UBA1-201ENST00000335972 NBEAQ8NFP9 2946 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 B3GALT5-AS1P59052 145 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 ZFP36L1Q07352 338 aaKnown RBP12.93□□□□□ -0.34
UBA1-201ENST00000335972 PAN3Q58A45 887 aaKnown RBP12.93□□□□□ -0.34
UBA1-201ENST00000335972 VAX1Q5SQQ9 334 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 MOB3CQ70IA8 216 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 HSD17B13Q7Z5P4 300 aaPredicted RBP12.93□□□□□ -0.34
UBA1-201ENST00000335972 CPNE2Q96FN4 548 aaPredicted RBP12.93□□□□□ -0.34
UBA1-201ENST00000335972 OSGIN2Q9Y236 505 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 CFAP47Q6ZTR5 3102 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 A0A087WZY1 265 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 ARPC4-TTLL3A0A0A6YYG9 625 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 TEX13DA0A0J9YY54 714 aaPredicted RBP12.93□□□□□ -0.34
UBA1-201ENST00000335972 NTN3O00634 580 aaPredicted RBP12.93□□□□□ -0.34
UBA1-201ENST00000335972 GEMIN2O14893 280 aaKnown RBP12.93□□□□□ -0.34
UBA1-201ENST00000335972 AGPAT2O15120 278 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 NAT2P11245 290 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 PLEKHN1Q494U1 663 aaPredicted RBP12.93□□□□□ -0.34
UBA1-201ENST00000335972 GPR137CQ8N3F9 429 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 ARRDC1Q8N5I2 433 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 PRO3102Q9H379 93 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 AK3Q9UIJ7 227 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 PCDHGA1Q9Y5H4 931 aa12.93□□□□□ -0.34
UBA1-201ENST00000335972 ZNF587BE7ETH6 402 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 MPZP25189 248 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 GSK3AP49840 483 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 PSG4Q00888 419 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 PHLDA2Q53GA4 152 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 OR2A2Q6IF42 318 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 TMEM88Q6PEY1 159 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 FAM89BQ8N5H3 189 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 M1APQ8TC57 530 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 PIK3IP1Q96FE7 263 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 SULT4A1Q9BR01 284 aa12.92□□□□□ -0.34
UBA1-201ENST00000335972 LOC102725191A0A1B0GVB3 256 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms