RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 J3QW42 95 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 UCHL1P09936 223 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 IGFBP3P17936 291 aaPredicted RBP14.03□□□□□ -0.16
SHOX-201ENST00000334060 NR4A2P43354 598 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 MAP2K3P46734 347 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 PRAMEF6Q5VXH4 476 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 C11orf71Q6IPW1 123 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 CCBE1Q6UXH8 406 aaPredicted RBP14.03□□□□□ -0.16
SHOX-201ENST00000334060 PARP16Q8N5Y8 322 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 OR52N4Q8NGI2 321 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 OR5D18Q8NGL1 313 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 CGGBP1Q9UFW8 167 aaPredicted RBP14.03□□□□□ -0.16
SHOX-201ENST00000334060 BAHCC1Q9P281 2608 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 PLATP00750 562 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 IGHV1-46P01743 117 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 ZNF20P17024 532 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 PSMA1P25786 263 aaKnown RBP14.03□□□□□ -0.16
SHOX-201ENST00000334060 MPPED2Q15777 294 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 NKPD1Q17RQ9 610 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 LRRTM1Q86UE6 522 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 ANGPTL5Q86XS5 388 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 MS4A15Q8N5U1 240 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 OR2Z1Q8NG97 314 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 CHST5Q9GZS9 411 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 DCSTAMPQ9H295 470 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 PRELID1Q9Y255 219 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 AK6Q9Y3D8 172 aaKnown RBP14.03□□□□□ -0.16
SHOX-201ENST00000334060 DSCAMO60469 2012 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 A0A0B4J203 849 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 ZNF816-ZNF321PA0A0X1KG74 233 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 HMX3A6NHT5 357 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 GPM6AP51674 278 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 P2RX3P56373 397 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 CCL8P80075 99 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 SPANXN2Q5MJ10 180 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 PLCXD3Q63HM9 321 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 ZNF529Q6P280 563 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 HAVCR2Q8TDQ0 301 aa14.02□□□□□ -0.16
SHOX-201ENST00000334060 ADAT1Q9BUB4 502 aaKnown RBP14.02□□□□□ -0.16
SHOX-201ENST00000334060 FAM230AA0A1W2PPH8 454 aa14.02□□□□□ -0.17
SHOX-201ENST00000334060 LYNX1G3V0Z9 82 aa14.02□□□□□ -0.17
SHOX-201ENST00000334060 NRASP01111 189 aa14.02□□□□□ -0.17
SHOX-201ENST00000334060 LYNX1P0DP58 116 aa14.02□□□□□ -0.17
SHOX-201ENST00000334060 SDC2P34741 201 aa14.02□□□□□ -0.17
SHOX-201ENST00000334060 SOX6P35712 828 aa14.02□□□□□ -0.17
SHOX-201ENST00000334060 RPS23P62266 143 aaKnown RBP14.02□□□□□ -0.17
SHOX-201ENST00000334060 ZNF826PQ6ZT77 177 aa14.02□□□□□ -0.17
SHOX-201ENST00000334060 CALHM1Q8IU99 346 aa14.02□□□□□ -0.17
SHOX-201ENST00000334060 PDZD2O15018 2839 aa14.01□□□□□ -0.17
SHOX-201ENST00000334060 MTRF1O75570 445 aaKnown RBP14.01□□□□□ -0.17
SHOX-201ENST00000334060 HSD17B12Q53GQ0 312 aa14.01□□□□□ -0.17
SHOX-201ENST00000334060 ATAD3CQ5T2N8 411 aa14.01□□□□□ -0.17
SHOX-201ENST00000334060 C1QL2Q7Z5L3 287 aa14.01□□□□□ -0.17
SHOX-201ENST00000334060 OR1M1Q8NGA1 313 aa14.01□□□□□ -0.17
SHOX-201ENST00000334060 SEH1LQ96EE3 360 aa14.01□□□□□ -0.17
SHOX-201ENST00000334060 UFSP2Q9NUQ7 469 aa14.01□□□□□ -0.17
SHOX-201ENST00000334060 CST4P01036 141 aa14□□□□□ -0.17
SHOX-201ENST00000334060 CALCBP10092 127 aa14□□□□□ -0.17
SHOX-201ENST00000334060 CD53P19397 219 aa14□□□□□ -0.17
SHOX-201ENST00000334060 SRMP19623 302 aa14□□□□□ -0.17
SHOX-201ENST00000334060 ZNF81P51508 661 aa14□□□□□ -0.17
SHOX-201ENST00000334060 CLDN12P56749 244 aa14□□□□□ -0.17
SHOX-201ENST00000334060 TIMM50Q3ZCQ8 353 aa14□□□□□ -0.17
SHOX-201ENST00000334060 CLVS2Q5SYC1 327 aa14□□□□□ -0.17
SHOX-201ENST00000334060 IDO2Q6ZQW0 420 aa14□□□□□ -0.17
SHOX-201ENST00000334060 SERPINA12Q8IW75 414 aa14□□□□□ -0.17
SHOX-201ENST00000334060 CCDC28AQ8IWP9 274 aa14□□□□□ -0.17
SHOX-201ENST00000334060 OR5P3Q8WZ94 311 aa14□□□□□ -0.17
SHOX-201ENST00000334060 ZNF488Q96MN9 340 aa14□□□□□ -0.17
SHOX-201ENST00000334060 SORCS2Q96PQ0 1159 aa14□□□□□ -0.17
SHOX-201ENST00000334060 CACNG6Q9BXT2 260 aa14□□□□□ -0.17
SHOX-201ENST00000334060 ZCCHC4Q9H5U6 513 aa14□□□□□ -0.17
SHOX-201ENST00000334060 METTL17Q9H7H0 456 aaPredicted RBP14□□□□□ -0.17
SHOX-201ENST00000334060 ZNF391Q9UJN7 358 aa14□□□□□ -0.17
SHOX-201ENST00000334060 SSR3Q9UNL2 185 aa14□□□□□ -0.17
SHOX-201ENST00000334060 FLNBO75369 2602 aaKnown RBP14□□□□□ -0.17
SHOX-201ENST00000334060 A0A0G2JK05 382 aa14□□□□□ -0.17
SHOX-201ENST00000334060 ANKRD30BLA7E2S9 258 aa14□□□□□ -0.17
SHOX-201ENST00000334060 RHBDL1O75783 438 aa14□□□□□ -0.17
SHOX-201ENST00000334060 HPXP02790 462 aa14□□□□□ -0.17
SHOX-201ENST00000334060 SLC2A2P11168 524 aaPredicted RBP14□□□□□ -0.17
SHOX-201ENST00000334060 CFL1P23528 166 aaKnown RBP14□□□□□ -0.17
SHOX-201ENST00000334060 AZGP1P25311 298 aaKnown RBP14□□□□□ -0.17
SHOX-201ENST00000334060 FGF9P31371 208 aaPredicted RBP14□□□□□ -0.17
SHOX-201ENST00000334060 RPS19P39019 145 aaKnown RBP14□□□□□ -0.17
SHOX-201ENST00000334060 PMELP40967 661 aa14□□□□□ -0.17
SHOX-201ENST00000334060 PLA2G7Q13093 441 aa14□□□□□ -0.17
SHOX-201ENST00000334060 EFNB3Q15768 340 aa14□□□□□ -0.17
SHOX-201ENST00000334060 GDPD3Q7L5L3 318 aa14□□□□□ -0.17
SHOX-201ENST00000334060 ZDHHC23Q8IYP9 409 aa14□□□□□ -0.17
SHOX-201ENST00000334060 FBXL14Q8N1E6 418 aa14□□□□□ -0.17
SHOX-201ENST00000334060 ZNF611Q8N823 705 aa14□□□□□ -0.17
SHOX-201ENST00000334060 C19orf18Q8NEA5 215 aa14□□□□□ -0.17
SHOX-201ENST00000334060 ITLN1Q8WWA0 313 aa14□□□□□ -0.17
SHOX-201ENST00000334060 ELMOD3Q96FG2 381 aa14□□□□□ -0.17
SHOX-201ENST00000334060 VRK1Q99986 396 aaPredicted RBP14□□□□□ -0.17
SHOX-201ENST00000334060 TMEM100Q9NV29 134 aa14□□□□□ -0.17
SHOX-201ENST00000334060 MRPL15Q9P015 296 aaKnown RBP14□□□□□ -0.17
SHOX-201ENST00000334060 A0A075B6Q4 140 aa13.99□□□□□ -0.17
SHOX-201ENST00000334060 ZNF732B4DXR9 585 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms