RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 FN3KRPQ9HA64 309 aa15.17■□□□□ 0.02
DDX28-201ENST00000332395 ELL3Q9HB65 397 aaPredicted RBP15.17■□□□□ 0.02
DDX28-201ENST00000332395 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.17■□□□□ 0.02
DDX28-201ENST00000332395 PFDN2Q9UHV9 154 aa15.17■□□□□ 0.02
DDX28-201ENST00000332395 NOSIPQ9Y314 301 aaKnown RBP15.17■□□□□ 0.02
DDX28-201ENST00000332395 IGKV3D-15A0A087WSY6 115 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 FAM166BA8MTA8 275 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 IL2RAP01589 272 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 IGHV3-9P01782 118 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 BLVRBP30043 206 aaPredicted RBP15.16■□□□□ 0.02
DDX28-201ENST00000332395 CALCRP30988 508 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 S100A11P31949 105 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 MAGEA5P43359 124 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 CBX5P45973 191 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 CLDN18P56856 261 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 AIMP2Q13155 320 aaKnown RBP15.16■□□□□ 0.02
DDX28-201ENST00000332395 ACTBL2Q562R1 376 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 VAX1Q5SQQ9 334 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 FAHD2BQ6P2I3 314 aaPredicted RBP15.16■□□□□ 0.02
DDX28-201ENST00000332395 HOGA1Q86XE5 327 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 OR10Z1Q8NGY1 313 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 SCARB1Q8WTV0 552 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 SPSB1Q96BD6 273 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 FAHD2AQ96GK7 314 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 MS4A7Q9GZW8 240 aaPredicted RBP15.16■□□□□ 0.02
DDX28-201ENST00000332395 TMEM9BQ9NQ34 198 aa15.16■□□□□ 0.02
DDX28-201ENST00000332395 C9orf170A2RU37 121 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 MRPL33O75394 65 aaKnown RBP15.15■□□□□ 0.02
DDX28-201ENST00000332395 FGF2P09038 288 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 ZNF806P0C7X5 589 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 PPP3CBP16298 524 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 CPT2P23786 658 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 MTCP1P56278 107 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 PRSS12P56730 875 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 IL13RA1P78552 427 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 HLXQ14774 488 aaPredicted RBP15.15■□□□□ 0.02
DDX28-201ENST00000332395 TSPO2Q5TGU0 170 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 LPCAT3Q6P1A2 487 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 TMUB2Q71RG4 321 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 ARRDC1Q8N5I2 433 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 ADAD2Q8NCV1 583 aaKnown RBP15.15■□□□□ 0.02
DDX28-201ENST00000332395 PRKACAP17612 351 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 LIN54Q6MZP7 749 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 PLXDC2Q6UX71 529 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 TERB2Q8NHR7 220 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 COQ8AQ8NI60 647 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 MARCH1Q8TCQ1 289 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 PECRQ9BY49 303 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 SLC6A15Q9H2J7 730 aa15.15■□□□□ 0.02
DDX28-201ENST00000332395 ZNF230Q9UIE0 474 aaPredicted RBP15.15■□□□□ 0.02
DDX28-201ENST00000332395 KNTC1P50748 2209 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 RFPL4AA6NLU0 287 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 RFPL4AL1F8VTS6 287 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 FARS2O95363 451 aaKnown RBP15.14■□□□□ 0.01
DDX28-201ENST00000332395 CD8AP01732 235 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 BVESQ8NE79 360 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 MITD1Q8WV92 249 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 FAM117AQ9C073 453 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 ARL6Q9H0F7 186 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 ZNF391Q9UJN7 358 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 TRAV14DV4A0A0A6YYC5 116 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 SERPINE3A8MV23 424 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 LGALS8O00214 317 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 EFSO43281 561 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 MMP7P09237 267 aaPredicted RBP15.14■□□□□ 0.01
DDX28-201ENST00000332395 TMEM225BP0DP42 221 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 ZNF708P17019 499 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 AKR1C4P17516 323 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 AMY2BP19961 511 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 CTAG1AP78358 180 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 CNN3Q15417 329 aaKnown RBP15.14■□□□□ 0.01
DDX28-201ENST00000332395 HSD17B13Q7Z5P4 300 aaPredicted RBP15.14■□□□□ 0.01
DDX28-201ENST00000332395 TMEM251Q8N6I4 163 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 OR5H2Q8NGV7 314 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 IP6K3Q96PC2 410 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 PHB2Q99623 299 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 ST6GALNAC5Q9BVH7 336 aa15.14■□□□□ 0.01
DDX28-201ENST00000332395 FAM230AA0A1W2PPH8 454 aa15.13■□□□□ 0.01
DDX28-201ENST00000332395 CCSO14618 274 aa15.13■□□□□ 0.01
DDX28-201ENST00000332395 RP2O75695 350 aa15.13■□□□□ 0.01
DDX28-201ENST00000332395 VAMP1P23763 118 aa15.13■□□□□ 0.01
DDX28-201ENST00000332395 SRSF4Q08170 494 aaKnown RBP15.13■□□□□ 0.01
DDX28-201ENST00000332395 NRN1LQ496H8 165 aa15.13■□□□□ 0.01
DDX28-201ENST00000332395 ALKAL2Q6UX46 152 aa15.13■□□□□ 0.01
DDX28-201ENST00000332395 STPG2Q8N412 459 aa15.13■□□□□ 0.01
DDX28-201ENST00000332395 CPNE2Q96FN4 548 aaPredicted RBP15.13■□□□□ 0.01
DDX28-201ENST00000332395 RGCCQ9H4X1 137 aa15.13■□□□□ 0.01
DDX28-201ENST00000332395 SLC7A10Q9NS82 523 aa15.13■□□□□ 0.01
DDX28-201ENST00000332395 IGKV1-27A0A075B6S5 117 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 RPA2P15927 270 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 SNU13P55769 128 aaKnown RBP15.12■□□□□ 0.01
DDX28-201ENST00000332395 PLGLB1Q02325 96 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 ARL6IP1Q15041 203 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 PABPC1L2AQ5JQF8 200 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 IL22RA1Q8N6P7 574 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 CASTOR1Q8WTX7 329 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 PDCD10Q9BUL8 212 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 LINC00470Q9BZP3 86 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 KMT2EQ8IZD2 1858 aa15.12■□□□□ 0.01
DDX28-201ENST00000332395 hCG_38984A0A1B0GV85 526 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms