RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 JMJD1CQ15652 2540 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 ANKRD61A6NGH8 418 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 A8MXK9 166 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 SRRM5B3KS81 715 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 H3BSH0 61 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 TNFRSF13BO14836 293 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-201ENST00000332345 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-201ENST00000332345 ADAM20O43506 726 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 GYPAP02724 150 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 CCDC159P0C7I6 412 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 LIMS3P0CW19 117 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 LIMS4P0CW20 117 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 PITPNBP48739 271 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 DMRTC1Q5HYR2 192 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 LYPD2Q6UXB3 125 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 IL17RELQ6ZVW7 336 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 NRG4Q8WWG1 115 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 GGHQ92820 318 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 C12orf43Q96C57 262 aaKnown RBP11.7□□□□□ -0.54
LIMS1-201ENST00000332345 FGF23Q9GZV9 251 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-201ENST00000332345 COMMD4Q9H0A8 199 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 C7orf69Q9H7B7 122 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 PLCXD1Q9NUJ7 323 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 CNOT2Q9NZN8 540 aaKnown RBP11.7□□□□□ -0.54
LIMS1-201ENST00000332345 DNAJB11Q9UBS4 358 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 HHLA2Q9UM44 414 aa11.7□□□□□ -0.54
LIMS1-201ENST00000332345 DIMT1Q9UNQ2 313 aaKnown RBP11.7□□□□□ -0.54
LIMS1-201ENST00000332345 TRBV2A0A0J9YWF9 115 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 PQLC2LA1A4F0 135 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 TMEM212A6NML5 194 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 OR4C45A6NMZ5 311 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 TRAPPC2LH3BP13 241 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 AKR7A2O43488 359 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 PIPP12273 146 aaPredicted RBP11.69□□□□□ -0.54
LIMS1-201ENST00000332345 ZNF20P17024 532 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 EGR1P18146 543 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 HAAOP46952 286 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 TGM4P49221 684 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 ETV1P50549 477 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 FUT6P51993 359 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 SEC61A1P61619 476 aaKnown RBP11.69□□□□□ -0.54
LIMS1-201ENST00000332345 HOXA4Q00056 320 aaPredicted RBP11.69□□□□□ -0.54
LIMS1-201ENST00000332345 ST3GAL4Q11206 333 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 RIPK1Q13546 671 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 KRTAP21-3Q3LHN1 58 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 CCDC58Q4VC31 144 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 CD276Q5ZPR3 534 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 WDR25Q64LD2 544 aaPredicted RBP11.69□□□□□ -0.54
LIMS1-201ENST00000332345 HAGHLQ6PII5 290 aaPredicted RBP11.69□□□□□ -0.54
LIMS1-201ENST00000332345 FAM90A1Q86YD7 464 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 BPIFB6Q8NFQ5 453 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 OR5AK2Q8NH90 309 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 FBLIM1Q8WUP2 373 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 AQP3Q92482 292 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 FGGYQ96C11 551 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 BABAM2Q9NXR7 383 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 RASL12Q9NYN1 266 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 KAAG1Q9UBP8 84 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 POLDIP2Q9Y2S7 368 aa11.69□□□□□ -0.54
LIMS1-201ENST00000332345 LOC105371242A0A075B767 164 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 IGHV3OR15-7A0A075B7D8 119 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 FAM230AA0A1W2PPH8 454 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 KIAA1324LA8MWY0 1029 aaPredicted RBP11.68□□□□□ -0.54
LIMS1-201ENST00000332345 TMPRSS2O15393 492 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 RHBDL1O75783 438 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 GLRA1P23415 457 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 AQP4P55087 323 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 GMFBP60983 142 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 CNN3Q15417 329 aaKnown RBP11.68□□□□□ -0.54
LIMS1-201ENST00000332345 UBE2V2Q15819 145 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 C11orf91Q3C1V1 193 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 ATPAF1Q5TC12 328 aaPredicted RBP11.68□□□□□ -0.54
LIMS1-201ENST00000332345 RPL22L1Q6P5R6 122 aaKnown RBP11.68□□□□□ -0.54
LIMS1-201ENST00000332345 BTNL3Q6UXE8 466 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 ZNF841Q6ZN19 808 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 SLC36A1Q7Z2H8 476 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 STX19Q8N4C7 294 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 OR13C3Q8NGS6 347 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 RAB40AQ8WXH6 277 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 ZDHHC16Q969W1 377 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 TMIGD2Q96BF3 282 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 TMPRSS13Q9BYE2 586 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 CHST5Q9GZS9 411 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 DNTTIP1Q9H147 329 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 MMP26Q9NRE1 261 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 PSORS1C1Q9UIG5 152 aa11.68□□□□□ -0.54
LIMS1-201ENST00000332345 E9PI62 339 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 J3QT63 122 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 XPNPEP2O43895 674 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 ZFPL1O95159 310 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 OCM2P0CE71 109 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 OCMP0CE72 109 aaPredicted RBP11.67□□□□□ -0.54
LIMS1-201ENST00000332345 HSPA13P48723 471 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 LCE2DQ5TA82 110 aaPredicted RBP11.67□□□□□ -0.54
LIMS1-201ENST00000332345 UTS2BQ765I0 119 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 PRIMA1Q86XR5 153 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 OR5D14Q8NGL3 314 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 NANPQ8TBE9 248 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 TRMT10AQ8TBZ6 339 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms