RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 MAB21L1Q13394 359 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 OR8B8Q15620 311 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 SNAPC1Q16533 368 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 OR2T2Q6IF00 324 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 ZFP1Q6P2D0 407 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 CFAP77Q6ZQR2 320 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 DCXRQ7Z4W1 244 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 ERI1Q8IV48 349 aaKnown RBP11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 BOLLQ8N9W6 283 aaKnown RBP11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 ZNF511Q8NB15 262 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 DDB2Q92466 427 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 ZNF582Q96NG8 517 aaPredicted RBP11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 SLC25A19Q9HC21 320 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 TRIM36Q9NQ86 728 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 UFSP2Q9NUQ7 469 aa11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 H2AFY2Q9P0M6 372 aaPredicted RBP11.9□□□□□ -0.5
CTHRC1-201ENST00000330295 TRBV23-1A0A0A0MS06 115 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 TRAV38-1A0A0B4J264 116 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 FAM183AA6NL82 134 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 ZNF878C9JN71 531 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 M0R135 149 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 PRODHO43272 600 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 GYPAP02724 150 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 ACSM4P0C7M7 580 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 PAX6P26367 422 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 VDAC2P45880 294 aaPredicted RBP11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 GRB2P62993 217 aaKnown RBP11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 CNN3Q15417 329 aaKnown RBP11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 TMEM95Q3KNT9 176 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 KLHL12Q53G59 568 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 ARSJQ5FYB0 599 aaPredicted RBP11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 SLC35D3Q5M8T2 416 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 NCR3LG1Q68D85 454 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 PLBD1Q6P4A8 553 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 DRAM2Q6UX65 266 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 FBXW12Q6X9E4 464 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 AMIGO2Q86SJ2 522 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 SBSPONQ8IVN8 264 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 FGFRL1Q8N441 504 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 CELF2-AS1Q8N7Q2 184 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 OR6N2Q8NGY6 317 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 PIFOQ8TCI5 191 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 MYDGFQ969H8 173 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 ZNF799Q96GE5 643 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 AJUBAQ96IF1 538 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 WDR76Q9H967 626 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 TVP23BQ9NYZ1 205 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 PTTG3PQ9NZH4 202 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 RNF7Q9UBF6 113 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 NOP16Q9Y3C1 178 aaKnown RBP11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 ORC6Q9Y5N6 252 aa11.89□□□□□ -0.51
CTHRC1-201ENST00000330295 PLECQ15149 4684 aaKnown RBP11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 ALMS1Q8TCU4 4167 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 F2RL2O00254 374 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 HLA-DPB1P04440 258 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 CLUP10909 449 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 HSD11B1P28845 292 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 DAPP51397 102 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 RAD23AP54725 363 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 ACTR3P61158 418 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 EIF2B1Q14232 305 aaKnown RBP11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 MPPED2Q15777 294 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 PCK2Q16822 640 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 LCN1P1Q5VSP4 162 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 COLCA1Q6ZS62 124 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 MRPL21Q7Z2W9 205 aaKnown RBP11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 CPOQ8IVL8 374 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 SLAMF6Q96DU3 332 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 MED20Q9H944 212 aa11.88□□□□□ -0.51
CTHRC1-201ENST00000330295 A0A1B0GWJ7 208 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 OOEPA6NGQ2 149 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 ALDOBP05062 364 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 KPNB1Q14974 876 aaKnown RBP11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 PTGES3Q15185 160 aaKnown RBP11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 KRTAP27-1Q3LI81 207 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 PRAMEF6Q5VXH4 476 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 ETV3LQ6ZN32 361 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 Q6ZS46 218 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 PGAP1Q75T13 922 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 DPY19L4Q7Z388 723 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 BHLHE23Q8NDY6 225 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 SPRYD4Q8WW59 207 aaPredicted RBP11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 ISOC1Q96CN7 298 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 KCNJ15Q99712 375 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 GABARAPL1Q9H0R8 117 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 OPA3Q9H6K4 179 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 PNRC2Q9NPJ4 139 aaKnown RBP11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 TMEM100Q9NV29 134 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 KAAG1Q9UBP8 84 aa11.87□□□□□ -0.51
CTHRC1-201ENST00000330295 HECTD4Q9Y4D8 3996 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 IQCF6A8MYZ5 107 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 H2BFMP0C1H6 154 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 RPS27P42677 84 aaKnown RBP11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 PRKXP51817 358 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 RSPO1Q2MKA7 263 aaPredicted RBP11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 KHDC1LQ5JSQ8 128 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 LINC01590Q5TEZ4 76 aa11.86□□□□□ -0.51
CTHRC1-201ENST00000330295 TMEM236Q5W0B7 351 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms