RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CEACAM16Q2WEN9 425 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 BEX5Q5H9J7 111 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 CLEC18BQ6UXF7 455 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.69□□□□□ -0.38
TPM3-206ENST00000330188 GALNTL5Q7Z4T8 443 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 TMEM17Q86X19 198 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 PDZD9Q8IXQ8 264 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 RELL2Q8NC24 303 aaPredicted RBP12.69□□□□□ -0.38
TPM3-206ENST00000330188 FGFBP3Q8TAT2 258 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 THAP6Q8TBB0 222 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 C17orf50Q8WW18 174 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 ZNF845Q96IR2 970 aaPredicted RBP12.69□□□□□ -0.38
TPM3-206ENST00000330188 SCGB3A2Q96PL1 93 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 DDA1Q9BW61 102 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 EHFQ9NZC4 300 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 MBD2Q9UBB5 411 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 MCTS1Q9ULC4 181 aaKnown RBP12.69□□□□□ -0.38
TPM3-206ENST00000330188 IGKV1-27A0A075B6S5 117 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 HTR3BO95264 441 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 JMJD7P0C870 316 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 ZP3P21754 424 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 GABRR1P24046 479 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 MTCP1P56278 107 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 PRSS12P56730 875 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 RIPPLY2Q5TAB7 128 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 OVCH2Q7RTZ1 564 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 C6orf201Q7Z4U5 140 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 OR5AP2Q8NGF4 316 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 ABHD3Q8WU67 409 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 CPNE4Q96A23 557 aaPredicted RBP12.68□□□□□ -0.38
TPM3-206ENST00000330188 THOC3Q96J01 351 aaKnown RBP12.68□□□□□ -0.38
TPM3-206ENST00000330188 CDC6Q99741 560 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 NMES1Q9C002 83 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 OR2H1Q9GZK4 316 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 WNT5BQ9H1J7 359 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 PPA2Q9H2U2 334 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 GPR35Q9HC97 309 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 C13orf42A0A1B0GVH6 325 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 FIGNL2A6NMB9 653 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 TMEM225BP0DP42 221 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 M6PRP20645 277 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 LUMP51884 338 aaPredicted RBP12.68□□□□□ -0.38
TPM3-206ENST00000330188 ARPC4P59998 168 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 PPA1Q15181 289 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 SLC9A3R2Q15599 337 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 RTL6Q6ICC9 239 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 SPINK14Q6IE38 97 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 LINC00052Q96N35 136 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 NECAB3Q96P71 396 aaPredicted RBP12.68□□□□□ -0.38
TPM3-206ENST00000330188 SLC25A32Q9H2D1 315 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 CHMP1AQ9HD42 196 aaPredicted RBP12.68□□□□□ -0.38
TPM3-206ENST00000330188 RASL12Q9NYN1 266 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 LRFN1Q9P244 771 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 TIMM10BQ9Y5J6 103 aa12.68□□□□□ -0.38
TPM3-206ENST00000330188 ZDBF2Q9HCK1 2354 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 A0A0B4J2A0 478 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 FAM230AA0A1W2PPH8 454 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 A8MXK9 166 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 SPRY1O43609 319 aaPredicted RBP12.67□□□□□ -0.38
TPM3-206ENST00000330188 ANGPTL7O43827 346 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 PSMB6P28072 239 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 CNN3Q15417 329 aaKnown RBP12.67□□□□□ -0.38
TPM3-206ENST00000330188 SKA3Q8IX90 412 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 ZNF75AQ96N20 296 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 METTL9Q9H1A3 318 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 ZNF701Q9NV72 531 aaPredicted RBP12.67□□□□□ -0.38
TPM3-206ENST00000330188 PRR13Q9NZ81 148 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 FOXJ2Q9P0K8 574 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 SHPKQ9UHJ6 478 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 BOKQ9UMX3 212 aaPredicted RBP12.67□□□□□ -0.38
TPM3-206ENST00000330188 SESN1Q9Y6P5 492 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 A0A1W2PNU3 283 aaPredicted RBP12.67□□□□□ -0.38
TPM3-206ENST00000330188 TEX46H3BTG2 121 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 MSTNO14793 375 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 FGF2P09038 288 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 RPS2P15880 293 aaKnown RBP12.67□□□□□ -0.38
TPM3-206ENST00000330188 PRKACBP22694 351 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 GLRA1P23415 457 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 CHRFAM7AQ494W8 412 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 NSUN5P2Q63ZY6 315 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 TMEM42Q69YG0 159 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 PLXDC2Q6UX71 529 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 ZBTB44Q8NCP5 570 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 EMG1Q92979 244 aaKnown RBP12.67□□□□□ -0.38
TPM3-206ENST00000330188 ZNF471Q9BX82 626 aaPredicted RBP12.67□□□□□ -0.38
TPM3-206ENST00000330188 RAB18Q9NP72 206 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 PLEKHJ1Q9NW61 149 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 CSAG2Q9Y5P2 127 aa12.67□□□□□ -0.38
TPM3-206ENST00000330188 FREM2Q5SZK8 3169 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 LNP1A1A4G5 178 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 ADAP1O75689 374 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 NEURL1O76050 574 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 SERPINA5P05154 406 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 PCBD1P61457 104 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 ANKRD55Q3KP44 614 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 NKAPLQ5M9Q1 402 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 FAM74A1Q5RGS3 127 aa12.66□□□□□ -0.38
TPM3-206ENST00000330188 HSD17B13Q7Z5P4 300 aaPredicted RBP12.66□□□□□ -0.38
TPM3-206ENST00000330188 INO80EQ8NBZ0 244 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms