RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 BTN2A1Q7KYR7 527 aa22.9■■□□□ 1.26
ATPAF1-201ENST00000329231 KCTD20Q7Z5Y7 419 aa22.9■■□□□ 1.26
ATPAF1-201ENST00000329231 CCDC54Q8NEL0 328 aa22.9■■□□□ 1.26
ATPAF1-201ENST00000329231 OR5T2Q8NGG2 359 aa22.9■■□□□ 1.26
ATPAF1-201ENST00000329231 ADI1Q9BV57 179 aa22.9■■□□□ 1.26
ATPAF1-201ENST00000329231 SNTG1Q9NSN8 517 aa22.9■■□□□ 1.26
ATPAF1-201ENST00000329231 AASSQ9UDR5 926 aa22.9■■□□□ 1.26
ATPAF1-201ENST00000329231 STAB1Q9NY15 2570 aa22.9■■□□□ 1.26
ATPAF1-201ENST00000329231 DAPL1A0PJW8 107 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 NKX6-3A6NJ46 265 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 SYT7O43581 403 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 NDUFB3O43676 98 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 RHBDL1O75783 438 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 IGHV4-38-2P0DP08 117 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 GLRA1P23415 457 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 ISL1P61371 349 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 TP53I3Q53FA7 332 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 HAGHLQ6PII5 290 aaPredicted RBP22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 FAM216BQ8N7L0 139 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 AQP3Q92482 292 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 PLEKHA1Q9HB21 404 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 GPR173Q9NS66 373 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 ACOXLQ9NUZ1 547 aa22.89■■□□□ 1.25
ATPAF1-201ENST00000329231 TRAV40A0A0B4J280 105 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 ZNF879B4DU55 563 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 J3QRE1 110 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 GPR37O15354 613 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 FCN3O75636 299 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 TGM4P49221 684 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 SLC34A1Q06495 639 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 TUSC1Q2TAM9 212 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 LRRC10Q5BKY1 277 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 TTC23Q5W5X9 447 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 ZNF573Q86YE8 665 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 SIGLECL1Q8N7X8 197 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 NLKQ9UBE8 527 aa22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 NKX1-2Q9UD57 310 aaPredicted RBP22.88■■□□□ 1.25
ATPAF1-201ENST00000329231 IGHV3OR16-10A0A075B7F0 116 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 A0A1B0GW55 424 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 PLATP00750 562 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 DUX4L2P0CJ85 424 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 DUX4L3P0CJ86 424 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 DUX4L4P0CJ87 422 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 DUX4L5P0CJ88 424 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 DUX4L6P0CJ89 424 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 DUX4L7P0CJ90 424 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 CDONQ4KMG0 1287 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 DUX4L9Q6RFH8 374 aaPredicted RBP22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 C9orf139Q6ZV77 190 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 BCL6BQ8N143 479 aaPredicted RBP22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 PRSS35Q8N3Z0 413 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 ACBD7Q8N6N7 88 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 ANGPTL6Q8NI99 470 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 FAM216AQ8WUB2 273 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 CYGBQ8WWM9 190 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 TMIGD2Q96BF3 282 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 MRPL48Q96GC5 212 aaKnown RBP22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 MED30Q96HR3 178 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 MYCBPQ99417 103 aaPredicted RBP22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 DUX4Q9UBX2 424 aa22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 RPUSD1Q9UJJ7 312 aaKnown RBP22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 EXOGQ9Y2C4 368 aaKnown RBP22.87■■□□□ 1.25
ATPAF1-201ENST00000329231 A6NIN4 97 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 OR2AT4A6NND4 320 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 TOX4O94842 621 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 UBCP0CG48 685 aaKnown RBP22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 AMY2BP19961 511 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 HAAOP46952 286 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 IKZF1Q13422 519 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 GPR157Q5UAW9 335 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 METTL11BQ5VVY1 283 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 ZNF788Q6ZQV5 615 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 DHRSXQ8N5I4 330 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 LGALS12Q96DT0 336 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 PCGF1Q9BSM1 259 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 VCXQ9H320 206 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 RASL12Q9NYN1 266 aa22.86■■□□□ 1.25
ATPAF1-201ENST00000329231 PQLC2LA1A4F0 135 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 ANKRD61A6NGH8 418 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 J3QT63 122 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 BPIFB3P59826 476 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 IL13RA1P78552 427 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 ADARB1P78563 741 aaKnown RBP22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 ZNF91Q05481 1191 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 ZNF691Q5VV52 312 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 ZDHHC22Q8N966 263 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 APH1BQ8WW43 257 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 WDFY2Q96P53 400 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 CNTD2Q9H8S5 307 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 ESM1Q9NQ30 184 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 POLDIP2Q9Y2S7 368 aa22.85■■□□□ 1.25
ATPAF1-201ENST00000329231 DBTP11182 482 aaKnown RBP22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 KIR3DL2P43630 455 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 OR12D2P58182 307 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 ACTA2P62736 377 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 ACTG2P63267 376 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 FGFRL1Q8N441 504 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 POC1AQ8NBT0 407 aa22.84■■□□□ 1.25
ATPAF1-201ENST00000329231 OR2G2Q8NGZ5 317 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms