RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CHATP28329 748 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 OR1D4P47884 311 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 SLC37A1P57057 533 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 FXYD4P59646 89 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 FAM3AP98173 230 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 C16orf47Q6ZP98 133 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-202ENST00000318266 P4HA3Q7Z4N8 544 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 YAF2Q8IY57 180 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 Q8WTZ3 238 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 C11orf40Q8WZ69 217 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 SCGB3A2Q96PL1 93 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF700Q9H0M5 742 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 CERS4Q9HA82 394 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 LMAN1LQ9HAT1 526 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 FAM86C1Q9NVL1 165 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 B3GALT1Q9Y5Z6 326 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 MUC22E2RYF6 1773 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-202ENST00000318266 B4DGG1 531 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 ST8SIA5O15466 376 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 MBPP02686 304 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-202ENST00000318266 TRGC2P03986 189 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 CHRM2P08172 466 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 SOD3P08294 240 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 MDKP21741 143 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-202ENST00000318266 CARD17Q5XLA6 110 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 SGPP2Q8IWX5 399 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 ZFP62Q8NB50 900 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-202ENST00000318266 KCNG3Q8TAE7 436 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 PTPMT1Q8WUK0 201 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-202ENST00000318266 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-202ENST00000318266 CCNL2Q96S94 520 aaPredicted RBP8.51□□□□□ -1.05
PTPRA-202ENST00000318266 GPR84Q9NQS5 396 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 VDAC3Q9Y277 283 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 PRUNE2Q8WUY3 3088 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 MYO7BQ6PIF6 2116 aa8.51□□□□□ -1.05
PTPRA-202ENST00000318266 PHF3Q92576 2039 aaKnown RBP8.51□□□□□ -1.05
PTPRA-202ENST00000318266 BORCS7-ASMTA0A0B4J1R7 106 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 GSTP1P09211 210 aaKnown RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 GABRR1P24046 479 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 PMELP40967 661 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 MMP16P51512 607 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 UBE2KP61086 200 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 SSTP61278 116 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HHEXQ03014 270 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 USF2Q15853 346 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 TMEM196Q5HYL7 178 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 C6orf201Q7Z4U5 140 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 OR5AS1Q8N127 324 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 C17orf78Q8N4C9 275 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 C19orf47Q8N9M1 422 aaKnown RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF610Q8N9Z0 462 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 OR10S1Q8NGN2 331 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 CA5BP1Q8WTZ4 195 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 GTF3AQ92664 365 aaKnown RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 NTNG2Q96CW9 530 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 RAB39BQ96DA2 213 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 LIN37Q96GY3 246 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 MESP1Q9BRJ9 268 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 IER2Q9BTL4 223 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 PBDC1Q9BVG4 233 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 PARPBPQ9NWS1 579 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF319Q9P2F9 582 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HS3ST3B1Q9Y662 390 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 WDFY3Q8IZQ1 3526 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 PTPRSQ13332 1948 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 DHRS7CA6NNS2 312 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 H3BQ15 152 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H2BKO60814 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 GAPDHP04406 335 aaKnown RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HPNP05981 417 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H2BJP06899 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 PGCP20142 388 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H2BOP23527 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H2BBP33778 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 NOVA1P51513 510 aaKnown RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H2BDP58876 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 ERVFRD-1P60508 538 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H2BCP62807 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 PLCXD2Q0VAA5 305 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST2H2BEQ16778 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 PHLDA2Q53GA4 152 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 KHDC3LQ587J8 217 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 LYZL2Q7Z4W2 148 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 CPEB2Q7Z5Q1 589 aaKnown RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 LHFPL1Q86WI0 220 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 LYPD6BQ8NI32 183 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 THAP3Q8WTV1 239 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 RNF133Q8WVZ7 376 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 EMG1Q92979 244 aaKnown RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H2BHQ93079 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 ZDHHC12Q96GR4 267 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 C1orf147Q96MC9 270 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H2BNQ99877 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H2BMQ99879 126 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 RPP25Q9BUL9 199 aaKnown RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 OR10A2Q9H208 303 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 OPA3Q9H6K4 179 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 SOHLH2Q9NX45 425 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms