RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 NHLRC1Q6VVB1 395 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 MOB3BQ86TA1 216 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 STX12Q86Y82 276 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 RPEQ96AT9 228 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 HAO2Q9NYQ3 351 aa8.12□□□□□ -1.11
PTPRE-202ENST00000306042 SRPXP78539 464 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 HLXQ14774 488 aaPredicted RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 SLC9A3R2Q15599 337 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 KRBOX4Q5JUW0 171 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 STEAP1BQ6NZ63 245 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 OR51H1Q8NH63 302 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 WDYHV1Q96HA8 205 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 TMEM68Q96MH6 324 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF275Q9NSD4 429 aaPredicted RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 DEPPQ9NTK1 212 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 PPP1R14DQ9NXH3 145 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 PTP4A3O75365 173 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 ACSM4P0C7M7 580 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 RPA2P15927 270 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 GNLYP22749 145 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 OPRL1P41146 370 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 GNB1P62873 340 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 FABP5Q01469 135 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 TIMM23BQ5SRD1 257 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 METTL11BQ5VVY1 283 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 LAX1Q8IWV1 398 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 RNF133Q8WVZ7 376 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 RNASE6Q93091 150 aaKnown RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 TMEM246Q9BRR3 403 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 TMEM235A6NFC5 223 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 GPR137BO60478 399 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 ZG16O60844 167 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 PNPP00491 289 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 HOXB5P09067 269 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 TUBG1P23258 451 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 PDLIM4P50479 330 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 DLX5P56178 289 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 CDC20BQ86Y33 519 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 MUC20Q8N307 709 aaPredicted RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 ARHGEF39Q8N4T4 335 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 C12orf4Q9NQ89 552 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 TUBG2Q9NRH3 451 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 NUBP2Q9Y5Y2 271 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 MS4A18H0YCH9 400 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 HLA-AP01891 365 aaKnown RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 CPN1P15169 458 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 GIFP27352 417 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 CEACAM3P40198 252 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 ECI1P42126 302 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 PTGFRP43088 359 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 TATDN3Q17R31 274 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 MS4A18Q3C1V0 323 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 PHLDA2Q53GA4 152 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 CCBE1Q6UXH8 406 aaPredicted RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 FADS6Q8N9I5 356 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF251Q9BRH9 671 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF471Q9BX82 626 aaPredicted RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 ASCL3Q9NQ33 180 aa8.11□□□□□ -1.11
PTPRE-202ENST00000306042 ZNF629Q9UEG4 869 aaPredicted RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 MRM2Q9UI43 246 aaKnown RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 EXOGQ9Y2C4 368 aaKnown RBP8.11□□□□□ -1.11
PTPRE-202ENST00000306042 M0QYG6 137 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 RPS19P39019 145 aaKnown RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 CDONQ4KMG0 1287 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 MUC15Q8N387 334 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 ADAMTS17Q8TE56 1095 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 SHARPINQ9H0F6 387 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 STARD10Q9Y365 291 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 CEPT1Q9Y6K0 416 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PPIAL4EA0A075B759 164 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PPIAL4DF5H284 164 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 SLC17A2O00624 439 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 GOSR2O14653 212 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PHF1O43189 567 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PRAF2O60831 178 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PPIAL4FP0DN26 164 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 TDGF1P13385 188 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 ALDH3B1P43353 468 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 RAB13P51153 203 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 RNLSQ5VYX0 342 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 SPNS3Q6ZMD2 512 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 C9orf106Q8NAJ2 232 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 SCPEP1Q9HB40 452 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PPIAL4AQ9Y536 164 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 NUP210Q8TEM1 1887 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 TMEM82A0PJX8 343 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 MEX3AA1L020 520 aaKnown RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 HMX3A6NHT5 357 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 CDRT15L2A8MXV6 281 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 F5H0A9 414 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 TRAF3IP2O43734 574 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 SC5DO75845 299 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 GABARAPO95166 117 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 TGM6O95932 706 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 TFAP2AP05549 437 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 JUNBP17275 347 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PRRX1P54821 245 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 PDCD1Q15116 288 aa8.1□□□□□ -1.11
PTPRE-202ENST00000306042 RBMS2Q15434 407 aaKnown RBP8.1□□□□□ -1.11
PTPRE-202ENST00000306042 SLC35G3Q8N808 338 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms