RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ADAT1Q9BUB4 502 aaKnown RBP12.45□□□□□ -0.42
PRKCB-201ENST00000303531 NDRG3Q9UGV2 375 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 SPAG17Q6Q759 2223 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 OR2T2Q6IF00 324 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF586Q9NXT0 402 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 S100A8P05109 93 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 SLC37A1P57057 533 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 OR5M9Q8NGP3 310 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 BARX1Q9HBU1 254 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-201ENST00000303531 MTCH2Q9Y6C9 303 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 COX7A2P2O60397 106 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 KRASP01116 189 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 HLXQ14774 488 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-201ENST00000303531 UQCC3Q6UW78 93 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 MRGPREQ86SM8 312 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 OR10V1Q8NGI7 309 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 GNG3P63215 75 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 C12orf57Q99622 126 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF835Q9Y2P0 537 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF574Q6ZN55 896 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-201ENST00000303531 PLPPR2Q96GM1 343 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 COX14Q96I36 57 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 FAAP24Q9BTP7 215 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 TRGV10A0A0A0MS01 117 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 CST4P01036 141 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 OR3A4PP47883 348 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 PPP1CAP62136 330 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF774Q6NX45 483 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 CBLN3Q6UW01 205 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 KIAA1958Q8N8K9 716 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 CADM4Q8NFZ8 388 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 MOGAT1Q96PD6 335 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 RAB18Q9NP72 206 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 STRCQ7RTU9 1775 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 SFT2D2O95562 160 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF17P17021 662 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 DRD3P35462 400 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF141Q15928 474 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-201ENST00000303531 CACFD1Q9UGQ2 172 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 LINC01387J3KSC0 135 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 SPRY3O43610 288 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 MPGP29372 298 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 CSF2RBP32927 897 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 TMEM267Q0VDI3 215 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-201ENST00000303531 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 CXorf58Q96LI9 332 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 IGHV1OR21-1A0A087WYE8 117 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 TRGV5A0A0B4J1U4 118 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 CD160O95971 181 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 CELA2BP08218 269 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-201ENST00000303531 COL9A1P20849 921 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 RAG2P55895 527 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 C21orf58P58505 322 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 GUK1Q16774 197 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 KHDC1LQ5JSQ8 128 aa12.44□□□□□ -0.42
PRKCB-201ENST00000303531 C16orf47Q6ZP98 133 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-201ENST00000303531 C9orf170A2RU37 121 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 FZD5Q13467 585 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 TMEM18Q96B42 140 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 GAR1Q9NY12 217 aaKnown RBP12.43□□□□□ -0.42
PRKCB-201ENST00000303531 ZIC1Q15915 447 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 DEGS2Q6QHC5 323 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 NRTNQ99748 197 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 ZDHHC11Q9H8X9 412 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 CCDC187A0A096LP49 1063 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 MASP2O00187 686 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 PLPP3O14495 311 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 GP1BAP07359 652 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 CTLA4P16410 223 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 GNB2P62879 340 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 NHLRC1Q6VVB1 395 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 PCED1AQ9H1Q7 454 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF275Q9NSD4 429 aaPredicted RBP12.43□□□□□ -0.42
PRKCB-201ENST00000303531 CDC14BO60729 498 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 MPZL1O95297 269 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 CYC1P08574 325 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 TMEM92Q6UXU6 159 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF429Q86V71 674 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 FAM122AQ96E09 287 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 ACY3Q96HD9 319 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 NDFIP1Q9BT67 221 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 ADAM20O43506 726 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 PAX6P26367 422 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 TIAL1Q01085 375 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRKCB-201ENST00000303531 Q8IYB0 196 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 ABHD1Q96SE0 405 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 MARVELD1Q9BSK0 173 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 ESRP2Q9H6T0 727 aaKnown RBP12.43□□□□□ -0.42
PRKCB-201ENST00000303531 CNTD2Q9H8S5 307 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 TMED3Q9Y3Q3 217 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 PRSS23O95084 383 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 HPP00738 406 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 KCNJ3P48549 501 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 SPICQ8N5J4 248 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 OR2Z1Q8NG97 314 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 MMP26Q9NRE1 261 aa12.43□□□□□ -0.42
PRKCB-201ENST00000303531 TRGV8A0A0C4DH27 118 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 M0R1X1 148 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 SCAND1P57086 179 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms