RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 GSTP1P09211 210 aaKnown RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 PTGER4P35408 488 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 RPS27AP62979 156 aaKnown RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 RBMS2Q15434 407 aaKnown RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 C3P1Q6ZMU1 363 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 CDH24Q86UP0 819 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 TMEM229BQ8NBD8 167 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 FLVCR2Q9UPI3 526 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 A0A0A6YYJ9 748 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 DLL1O00548 723 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 ZNF780AO75290 641 aaPredicted RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 RRAS2P62070 204 aaPredicted RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 MRPS15P82914 257 aaKnown RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 PRDX4Q13162 271 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 GABRA6Q16445 453 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 ZFP69Q49AA0 526 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 RNASE10Q5GAN6 216 aaKnown RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 NKAPLQ5M9Q1 402 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 C1orf185Q5T7R7 199 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 OR51S1Q8NGJ8 323 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 C1orf147Q96MC9 270 aaPredicted RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 NUDT16L1Q9BRJ7 211 aaKnown RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 OPN3Q9H1Y3 402 aaPredicted RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 GPR160Q9UJ42 338 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 SCP2D1Q9UJQ7 156 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 M0QYG6 137 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 HIST1H1DP16402 221 aaKnown RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 ALDH3B1P43353 468 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 TMPRSS3P57727 454 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 ARL6IP1Q15041 203 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 SCGB2B2Q4G0G5 96 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 SPATA46Q5T0L3 261 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 ZDHHC23Q8IYP9 409 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 CISD2Q8N5K1 135 aaKnown RBP12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 ZNF610Q8N9Z0 462 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 BEST4Q8NFU0 473 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 OR51J1Q9H342 316 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 PLEKHA6Q9Y2H5 1048 aa12.54□□□□□ -0.4
SHCBP1-201ENST00000303383 IFNA6P05013 189 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 RAG2P55895 527 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 ATAD3CQ5T2N8 411 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 TMEM42Q69YG0 159 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 OR6F1Q8NGZ6 308 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 ARHGAP5-AS1Q96IT6 56 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 DISC1C4P0D8 188 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 BTF3P20290 206 aaKnown RBP12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 EIF2S3LQ2VIR3 472 aaKnown RBP12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 BEND4Q6ZU67 534 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 OR4D10Q8NGI6 311 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 OR51F2Q8NH61 342 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 PLSCR4Q9NRQ2 329 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 PLEKHJ1Q9NW61 149 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 MBD3L4A6NDZ8 208 aaPredicted RBP12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 MBD3L3A6NE82 208 aaPredicted RBP12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 MBD3L5A6NJ08 208 aaPredicted RBP12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 CD300LBA8K4G0 201 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 PRRG2O14669 202 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 PRAF2O60831 178 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 GUSBP1Q15486 140 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 OR4S1Q8NGB4 309 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 MBD3L2Q8NHZ7 208 aaPredicted RBP12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 CCDC120Q96HB5 630 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 DKK4Q9UBT3 224 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 ZNF222Q9UK12 451 aa12.53□□□□□ -0.4
SHCBP1-201ENST00000303383 UCNP55089 124 aa12.52□□□□□ -0.4
SHCBP1-201ENST00000303383 MEF2DQ14814 521 aa12.52□□□□□ -0.4
SHCBP1-201ENST00000303383 NKPD1Q17RQ9 610 aa12.52□□□□□ -0.4
SHCBP1-201ENST00000303383 RFPL4BQ6ZWI9 263 aa12.52□□□□□ -0.4
SHCBP1-201ENST00000303383 CXorf67Q86X51 503 aaPredicted RBP12.52□□□□□ -0.4
SHCBP1-201ENST00000303383 BPIFB2Q8N4F0 458 aa12.52□□□□□ -0.4
SHCBP1-201ENST00000303383 MGAQ8IWI9 3026 aa12.52□□□□□ -0.4
SHCBP1-201ENST00000303383 A0A0A6YYD4 124 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 NDUFB6O95139 128 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 CELA3BP08861 270 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 WNT5AP41221 380 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 CXADRP78310 365 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 GVQW1Q8N7I0 195 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 AGFG2O95081 481 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 CRHP06850 196 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 MELTFP08582 738 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 GPM6AP51674 278 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 PDZK1IP1Q13113 114 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 PNLIPRP3Q17RR3 467 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 OR2T2Q6IF00 324 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 UNQ6126/PRO20091Q6UXV3 157 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 C1orf162Q8NEQ5 155 aaPredicted RBP12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 STARD4Q96DR4 205 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 TINAGL1Q9GZM7 467 aaPredicted RBP12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 POU2F3Q9UKI9 436 aa12.52□□□□□ -0.41
SHCBP1-201ENST00000303383 CFAP47Q6ZTR5 3102 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 ZP1P60852 638 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 P2RY6Q15077 328 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 TAF9Q16594 264 aa12.51□□□□□ -0.41
SHCBP1-201ENST00000303383 METTL11BQ5VVY1 283 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms