RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ZCCHC4Q9H5U6 513 aa12.9□□□□□ -0.34
CCDC140-201ENST00000295226 LAMP3Q9UQV4 416 aa12.9□□□□□ -0.34
CCDC140-201ENST00000295226 DSCAMO60469 2012 aa12.9□□□□□ -0.34
CCDC140-201ENST00000295226 SPG11Q96JI7 2443 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 DHRS7CA6NNS2 312 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 NOTOA8MTQ0 251 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 CST4P01036 141 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 MAS1P04201 325 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 CSF3P09919 207 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 DANCRP0C864 163 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 SLC2A2P11168 524 aaPredicted RBP12.89□□□□□ -0.35
CCDC140-201ENST00000295226 PRF1P14222 555 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 AZGP1P25311 298 aaKnown RBP12.89□□□□□ -0.35
CCDC140-201ENST00000295226 MAPK3P27361 379 aaPredicted RBP12.89□□□□□ -0.35
CCDC140-201ENST00000295226 KRTAP10-9P60411 292 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 SWI5Q1ZZU3 235 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 HSD17B12Q53GQ0 312 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 SPRNQ5BIV9 151 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 CLVS2Q5SYC1 327 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 HACD4Q5VWC8 232 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 PLCXD3Q63HM9 321 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 MZT2BQ6NZ67 158 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 CCDC54Q8NEL0 328 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 OR2Z1Q8NG97 314 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 PIGTQ969N2 578 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 CYSLTR2Q9NS75 346 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 MRPL15Q9P015 296 aaKnown RBP12.89□□□□□ -0.35
CCDC140-201ENST00000295226 HECTD1Q9ULT8 2610 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 PLSCR5A0PG75 271 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 FAM25AB3EWG3 89 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 FAM25CB3EWG5 89 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 FAM25GB3EWG6 89 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 B9A039 149 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 F5H5P2 479 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 BOLA2-SMG1P6H3BVE0 249 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 IGFBP3P17936 291 aaPredicted RBP12.89□□□□□ -0.35
CCDC140-201ENST00000295226 SRMP19623 302 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 ZNF81P51508 661 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 IL18Q14116 193 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 OR8G1Q15617 311 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 EFNB3Q15768 340 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 BAIAP2L2Q6UXY1 529 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 Q8N402 240 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 ZNF611Q8N823 705 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 DNAAF1Q8NEP3 725 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 OR5D14Q8NGL3 314 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 HPSE2Q8WWQ2 592 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 ADAT1Q9BUB4 502 aaKnown RBP12.89□□□□□ -0.35
CCDC140-201ENST00000295226 CHST5Q9GZS9 411 aa12.89□□□□□ -0.35
CCDC140-201ENST00000295226 RAI1Q7Z5J4 1906 aaPredicted RBP12.89□□□□□ -0.35
CCDC140-201ENST00000295226 USF3Q68DE3 2245 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 FAM230AA0A1W2PPH8 454 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 NCR1O76036 304 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 GOSR1O95249 250 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 ADRA2CP18825 462 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 ATF1P18846 271 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 THBS2P35442 1172 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 ZBTB37Q5TC79 503 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 NRARPQ7Z6K4 114 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 AKAP14Q86UN6 197 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 ZDHHC23Q8IYP9 409 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 OR1M1Q8NGA1 313 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 OR13G1Q8NGZ3 307 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 PP6455Q8WZ26 134 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 C10orf35Q96D05 121 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 DYNLRB1Q9NP97 96 aa12.88□□□□□ -0.35
CCDC140-201ENST00000295226 A0A0G2JK05 382 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 M0R233 179 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 IGHV1-46P01743 117 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 RAF1P04049 648 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 TRAPPC2P0DI81 140 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 TRAPPC2BP0DI82 140 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 SPNP16150 400 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 RAB3AP20336 220 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 NR4A2P43354 598 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 INPP1P49441 399 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 GPM6AP51674 278 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 AGAP6Q5VW22 663 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 C11orf71Q6IPW1 123 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 ZNF529Q6P280 563 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 LRRTM1Q86UE6 522 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 FTMTQ8N4E7 242 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 OR52N4Q8NGI2 321 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 OR8S1Q8NH09 359 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 OR5P3Q8WZ94 311 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 RFT1Q96AA3 541 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 C14orf79Q96F83 325 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 ELMOD3Q96FG2 381 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 RNF170Q96K19 258 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 VRK1Q99986 396 aaPredicted RBP12.87□□□□□ -0.35
CCDC140-201ENST00000295226 SLITRK2Q9H156 845 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 TCF7L1Q9HCS4 588 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 CBLN4Q9NTU7 201 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 EXTL2Q9UBQ6 330 aa12.87□□□□□ -0.35
CCDC140-201ENST00000295226 AK6Q9Y3D8 172 aaKnown RBP12.87□□□□□ -0.35
CCDC140-201ENST00000295226 CHD3Q12873 2000 aaKnown RBP12.87□□□□□ -0.35
CCDC140-201ENST00000295226 LOC100289279A0A1B0GTE1 492 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 SULT1B1O43704 296 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 ELK1P19419 428 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms