RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 DCUN1D4Q92564 292 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 SGK3Q96BR1 496 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 PHYHIPLQ96FC7 376 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 ARPC5LQ9BPX5 153 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 TM2D1Q9BX74 207 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 EHFQ9NZC4 300 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 DUX4Q9UBX2 424 aa13.17□□□□□ -0.3
CCDC116-201ENST00000292779 APOC1P02654 83 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 PGAM2P15259 253 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 NTF4P34130 210 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 TAS2R46P59540 309 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 SLC39A7Q92504 469 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 CDC6Q99741 560 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 RNF126Q9BV68 326 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 OSGIN2Q9Y236 505 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 GJE1A6NN92 205 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 MPTX1A8MV57 137 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 GLRA1P23415 457 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 OTX2P32243 289 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 CYCSP99999 105 aaKnown RBP13.16□□□□□ -0.3
CCDC116-201ENST00000292779 Q0VFX4 171 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 SNTB1Q13884 538 aaKnown RBP13.16□□□□□ -0.3
CCDC116-201ENST00000292779 ANKRD55Q3KP44 614 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 ELP2Q6IA86 826 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 SCGB3A2Q96PL1 93 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 GPR173Q9NS66 373 aa13.16□□□□□ -0.3
CCDC116-201ENST00000292779 SERPINE3A8MV23 424 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 SGCEO43556 437 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 GP1BAP07359 652 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 CNR1P21554 472 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 CRYGSP22914 178 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 CPT2P23786 658 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 ACP1P24666 158 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 ACKR3P25106 362 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 RAC3P60763 192 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 TAGLNQ01995 201 aaKnown RBP13.15□□□□□ -0.3
CCDC116-201ENST00000292779 PAN3Q58A45 887 aaKnown RBP13.15□□□□□ -0.3
CCDC116-201ENST00000292779 C6orf201Q7Z4U5 140 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 OR5AP2Q8NGF4 316 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 OR52H1Q8NGJ2 320 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 OR14L1PQ8NHC6 308 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 C10orf35Q96D05 121 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 SF3B5Q9BWJ5 86 aaKnown RBP13.15□□□□□ -0.3
CCDC116-201ENST00000292779 CRLF2Q9HC73 371 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 RAB18Q9NP72 206 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 ZNF701Q9NV72 531 aaPredicted RBP13.15□□□□□ -0.3
CCDC116-201ENST00000292779 CCDC187A0A096LP49 1063 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 TRBV6-7A0A0A0MS04 114 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 H0YIZ8 118 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 GABRR1P24046 479 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 PPIAP62937 165 aaKnown RBP13.15□□□□□ -0.3
CCDC116-201ENST00000292779 CHRFAM7AQ494W8 412 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 ZNF774Q6NX45 483 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 GALNTL5Q7Z4T8 443 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 PPP1R32Q7Z5V6 425 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 SEMA6DQ8NFY4 1073 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 RRNAD1Q96FB5 475 aaKnown RBP13.15□□□□□ -0.3
CCDC116-201ENST00000292779 DCHS1Q96JQ0 3298 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 SGCZQ96LD1 299 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 CEP250Q9BV73 2442 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 DNTTIP1Q9H147 329 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 TAS2R3Q9NYW6 316 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 TCFL5Q9UL49 500 aa13.15□□□□□ -0.3
CCDC116-201ENST00000292779 MCTS1Q9ULC4 181 aaKnown RBP13.15□□□□□ -0.3
CCDC116-201ENST00000292779 IGKV1D-8A0A087WSZ0 117 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 A0A0B4J2A0 478 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 TSPAN4O14817 238 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 SYNGR3O43761 229 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 P04436 131 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 TMEM225BP0DP42 221 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 SRD5A2P31213 254 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 MTCP1P56278 107 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 PRSS12P56730 875 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 CARD18P57730 90 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 HGFACQ04756 655 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 RAB35Q15286 201 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 DCAF12Q5T6F0 453 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 GGNQ86UU5 652 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 GPR137CQ8N3F9 429 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 SPERTQ8NA61 448 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 ZSCAN4Q8NAM6 433 aaPredicted RBP13.14□□□□□ -0.31
CCDC116-201ENST00000292779 BHLHE23Q8NDY6 225 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 PIK3IP1Q96FE7 263 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 SHPKQ9UHJ6 478 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 TEX13DA0A0J9YY54 714 aaPredicted RBP13.14□□□□□ -0.31
CCDC116-201ENST00000292779 B4E171 279 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 DNPH1O43598 174 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 RFPL3SP0C7P2 107 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 TCN2P20062 427 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 TSPAN7P41732 249 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 DRAM2Q6UX65 266 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 CCDC54Q8NEL0 328 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 REEP6Q96HR9 211 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 HDHD3Q9BSH5 251 aaPredicted RBP13.14□□□□□ -0.31
CCDC116-201ENST00000292779 PLEKHJ1Q9NW61 149 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 PADI1Q9ULC6 663 aa13.14□□□□□ -0.31
CCDC116-201ENST00000292779 A0A1W2PNU3 283 aaPredicted RBP13.13□□□□□ -0.31
CCDC116-201ENST00000292779 SIGLEC5O15389 551 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms