RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TPRKBQ9Y3C4 175 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 MAST4O15021 2626 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 SPG11Q96JI7 2443 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 TEX15Q9BXT5 2789 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 CCDC168Q8NDH2 2452 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 ROS1P08922 2347 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 OTOGQ6ZRI0 2925 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 TRAV20A0A0B4J274 112 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 OR4C45A6NMZ5 311 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 J3QT63 122 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 RGS10O43665 173 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 SYNGR1O43759 233 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 NXPH2O95156 264 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 ZFPL1O95159 310 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 PTBP3O95758 552 aaKnown RBP5.47□□□□□ -1.53
CD44-204ENST00000279452 CYB5AP00167 134 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 ISG15P05161 165 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 CDK1P06493 297 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 CD2P06729 351 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 HSMCR30P0CW71 290 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 AZGP1P25311 298 aaKnown RBP5.47□□□□□ -1.53
CD44-204ENST00000279452 C21orf33P30042 268 aaPredicted RBP5.47□□□□□ -1.53
CD44-204ENST00000279452 GABRA2P47869 451 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 TGM4P49221 684 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 RBP2P50120 134 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 CAPZA1P52907 286 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 DVL1P1P54792 670 aaPredicted RBP5.47□□□□□ -1.53
CD44-204ENST00000279452 MTCP1P56278 107 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 WNT4P56705 351 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 TAS2R43P59537 309 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 PPP3R1P63098 170 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 IKZF1Q13422 519 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 CDK5R1Q15078 307 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 MED22Q15528 200 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 UBE2V2Q15819 145 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 CCDC58Q4VC31 144 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 FAM120AOSQ5T036 256 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 LAIR2Q6ISS4 152 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 FDX2Q6P4F2 183 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 RPL22L1Q6P5R6 122 aaKnown RBP5.47□□□□□ -1.53
CD44-204ENST00000279452 LYPD2Q6UXB3 125 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 BTNL3Q6UXE8 466 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 ANGPTL5Q86XS5 388 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 FAM90A1Q86YD7 464 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 OR5T2Q8NGG2 359 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 OR5D18Q8NGL1 313 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 OR52N1Q8NH53 320 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 ZNF671Q8TAW3 534 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 GPR148Q8TDV2 347 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 PP6455Q8WZ26 134 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 ST8SIA4Q92187 359 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 H1FXQ92522 213 aaKnown RBP5.47□□□□□ -1.53
CD44-204ENST00000279452 ITFG2Q969R8 447 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 SLAMF9Q96A28 289 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 RFT1Q96AA3 541 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 SEH1LQ96EE3 360 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 ADAT3Q96EY9 351 aaPredicted RBP5.47□□□□□ -1.53
CD44-204ENST00000279452 ZNF488Q96MN9 340 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 CCL13Q99616 98 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 ZNF184Q99676 751 aaPredicted RBP5.47□□□□□ -1.53
CD44-204ENST00000279452 FAM192AQ9GZU8 254 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 WDR13Q9H1Z4 485 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 OR51I2Q9H344 312 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 PLCXD1Q9NUJ7 323 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 BABAM2Q9NXR7 383 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 LPAR3Q9UBY5 353 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 CDC42EP3Q9UKI2 254 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 BLOC1S6Q9UL45 172 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 RAB26Q9ULW5 256 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 LRCH1Q9Y2L9 728 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 CREBBPQ92793 2442 aa5.47□□□□□ -1.53
CD44-204ENST00000279452 LRBAP50851 2863 aa5.46□□□□□ -1.53
CD44-204ENST00000279452 MYO9AB2RTY4 2548 aa5.46□□□□□ -1.53
CD44-204ENST00000279452 PQLC2LA1A4F0 135 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SRRM5B3KS81 715 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 MAGEB3O15480 346 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 NDUFB3O43676 98 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SULT1B1O43704 296 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 RRP9O43818 475 aaKnown RBP5.46□□□□□ -1.54
CD44-204ENST00000279452 CRLF1O75462 422 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 TFF1P04155 84 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 MUC1P15941 1255 aaPredicted RBP5.46□□□□□ -1.54
CD44-204ENST00000279452 SRD5A1P18405 259 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 ATF1P18846 271 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 CELP19835 753 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 RAB3AP20336 220 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 PRKACBP22694 351 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 FUT6P51993 359 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 ATP1B3P54709 279 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SNU13P55769 128 aaKnown RBP5.46□□□□□ -1.54
CD44-204ENST00000279452 RIPPLY3P57055 190 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SMIM21Q3B7S5 101 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 TMEM42Q69YG0 159 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 FIP1L1Q6UN15 594 aaKnown RBP5.46□□□□□ -1.54
CD44-204ENST00000279452 LHFPL2Q6ZUX7 228 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SLC25A26Q70HW3 274 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SLC36A1Q7Z2H8 476 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SATL1Q86VE3 508 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 CALHM1Q8IU99 346 aa5.46□□□□□ -1.54
CD44-204ENST00000279452 SERPINA12Q8IW75 414 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms