RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 DCLRE1CQ96SD1 692 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 ANGPTL4Q9BY76 406 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SEMA4CQ9C0C4 833 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SRRQ9GZT4 340 aa2.54□□□□□ -2
HERC4-201ENST00000277817 C20orf85Q9H1P6 137 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SLC17A4Q9Y2C5 497 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TRBV5-3A0A0A0MS03 114 aa2.54□□□□□ -2
HERC4-201ENST00000277817 NSG1A0A0A6YYJ2 146 aa2.54□□□□□ -2
HERC4-201ENST00000277817 HELTA6NFD8 242 aa2.54□□□□□ -2
HERC4-201ENST00000277817 GJE1A6NN92 205 aa2.54□□□□□ -2
HERC4-201ENST00000277817 FFAR1O14842 300 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SSX4O60224 188 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR2F2O95006 317 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TSPAN15O95858 294 aa2.54□□□□□ -2
HERC4-201ENST00000277817 PMP2P02689 132 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF14P17017 642 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 CDK2P24941 298 aa2.54□□□□□ -2
HERC4-201ENST00000277817 S100A2P29034 98 aa2.54□□□□□ -2
HERC4-201ENST00000277817 DCTDP32321 178 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF93P35789 620 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 NUDT1P36639 197 aa2.54□□□□□ -2
HERC4-201ENST00000277817 FOLR3P41439 243 aa2.54□□□□□ -2
HERC4-201ENST00000277817 MTCP1P56278 107 aa2.54□□□□□ -2
HERC4-201ENST00000277817 DCDP81605 110 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 CDK5Q00535 292 aa2.54□□□□□ -2
HERC4-201ENST00000277817 RPL18Q07020 188 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 ACKR1Q16570 336 aa2.54□□□□□ -2
HERC4-201ENST00000277817 RSPO4Q2I0M5 234 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 PRTGQ2VWP7 1150 aa2.54□□□□□ -2
HERC4-201ENST00000277817 C12orf73Q69YU5 71 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR10K2Q6IF99 312 aa2.54□□□□□ -2
HERC4-201ENST00000277817 UNQ6126/PRO20091Q6UXV3 157 aa2.54□□□□□ -2
HERC4-201ENST00000277817 Q6ZTK2 550 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CREB3L2Q70SY1 520 aa2.54□□□□□ -2
HERC4-201ENST00000277817 RHOUQ7L0Q8 258 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CCDC71Q8IV32 467 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 DEFB123Q8N688 67 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZSCAN4Q8NAM6 433 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 MAFIPQ8WZ33 124 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TM4SF19Q96DZ7 209 aa2.54□□□□□ -2
HERC4-201ENST00000277817 RAB3CQ96E17 227 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF578Q96N58 590 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 SPACA5Q96QH8 159 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ATF6BQ99941 703 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ULBP2Q9BZM5 246 aa2.54□□□□□ -2
HERC4-201ENST00000277817 NIPAL2Q9H841 368 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SLC25A19Q9HC21 320 aa2.54□□□□□ -2
HERC4-201ENST00000277817 FGF20Q9NP95 211 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 EHFQ9NZC4 300 aa2.54□□□□□ -2
HERC4-201ENST00000277817 KLHL13Q9P2N7 655 aa2.54□□□□□ -2
HERC4-201ENST00000277817 KLK11Q9UBX7 282 aa2.54□□□□□ -2
HERC4-201ENST00000277817 FBXL4Q9UKA2 621 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR52A1Q9UKL2 312 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SLC22A13Q9Y226 551 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF175Q9Y473 711 aa2.54□□□□□ -2
HERC4-201ENST00000277817 BRCA2P51587 3418 aa2.54□□□□□ -2
HERC4-201ENST00000277817 A0A0B4J2A0 478 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TSPAN11A1L157 253 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OTOL1A6NHN0 477 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 FADS1O60427 444 aa2.54□□□□□ -2
HERC4-201ENST00000277817 DNAJB6O75190 326 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SOD1P00441 154 aa2.54□□□□□ -2
HERC4-201ENST00000277817 LIMS3P0CW19 117 aa2.54□□□□□ -2
HERC4-201ENST00000277817 LIMS4P0CW20 117 aa2.54□□□□□ -2
HERC4-201ENST00000277817 PTHLHP12272 177 aa2.54□□□□□ -2
HERC4-201ENST00000277817 FOSL2P15408 326 aa2.54□□□□□ -2
HERC4-201ENST00000277817 DPP4P27487 766 aa2.54□□□□□ -2
HERC4-201ENST00000277817 GDF1P27539 372 aa2.54□□□□□ -2
HERC4-201ENST00000277817 BLVRBP30043 206 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 DRD3P35462 400 aa2.54□□□□□ -2
HERC4-201ENST00000277817 RPL35P42766 123 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 CCL11P51671 97 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ATP5IP56385 69 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 RPL27P61353 136 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 PPIAP62937 165 aaKnown RBP2.54□□□□□ -2
HERC4-201ENST00000277817 ARL6IP1Q15041 203 aa2.54□□□□□ -2
HERC4-201ENST00000277817 TSC22D1Q15714 1073 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SLC35D3Q5M8T2 416 aa2.54□□□□□ -2
HERC4-201ENST00000277817 CLVS2Q5SYC1 327 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OPN5Q6U736 354 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF695Q8IW36 515 aa2.54□□□□□ -2
HERC4-201ENST00000277817 GCNT2Q8N0V5 402 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF709Q8N972 641 aa2.54□□□□□ -2
HERC4-201ENST00000277817 OR4D11Q8NGI4 311 aa2.54□□□□□ -2
HERC4-201ENST00000277817 GPR119Q8TDV5 335 aa2.54□□□□□ -2
HERC4-201ENST00000277817 IL1F10Q8WWZ1 152 aa2.54□□□□□ -2
HERC4-201ENST00000277817 C8orf44Q96CB5 159 aa2.54□□□□□ -2
HERC4-201ENST00000277817 SMIM19Q96E16 107 aa2.54□□□□□ -2
HERC4-201ENST00000277817 DDOQ99489 341 aa2.54□□□□□ -2
HERC4-201ENST00000277817 BANF2Q9H503 90 aa2.54□□□□□ -2
HERC4-201ENST00000277817 ZNF703Q9H7S9 590 aaPredicted RBP2.54□□□□□ -2
HERC4-201ENST00000277817 SHPKQ9UHJ6 478 aa2.54□□□□□ -2
HERC4-201ENST00000277817 MMP17Q9ULZ9 603 aa2.54□□□□□ -2
HERC4-201ENST00000277817 PLXNA2O75051 1894 aa2.53□□□□□ -2
HERC4-201ENST00000277817 FAM186AA6NE01 2351 aa2.53□□□□□ -2
HERC4-201ENST00000277817 TICRRQ7Z2Z1 1910 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CCDC168Q8NDH2 2452 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SPAG17Q6Q759 2223 aa2.53□□□□□ -2
HERC4-201ENST00000277817 IFITM5A6NNB3 132 aa2.53□□□□□ -2
HERC4-201ENST00000277817 IDSB3KWA1 339 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms