RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 FXYD6Q9H0Q3 95 aa9.7□□□□□ -0.86
MSH3-201ENST00000265081 MCTS1Q9ULC4 181 aaKnown RBP9.7□□□□□ -0.86
MSH3-201ENST00000265081 ZNF724A8MTY0 619 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 SLC6A9P48067 706 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 ZNF774Q6NX45 483 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 DHRS11Q6UWP2 260 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 ZNF546Q86UE3 836 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 ST8SIA2Q92186 375 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 PLEK2Q9NYT0 353 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 ARHGAP21Q5T5U3 1957 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 TEX13DA0A0J9YY54 714 aaPredicted RBP9.69□□□□□ -0.86
MSH3-201ENST00000265081 F5H5K5 113 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 FCGR2AP12318 317 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 EDN3P14138 238 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 ATP1B3P54709 279 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 RAB14P61106 215 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 CNN3Q15417 329 aaKnown RBP9.69□□□□□ -0.86
MSH3-201ENST00000265081 PLXDC2Q6UX71 529 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 OR51T1Q8NGJ9 327 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 SDHAF2Q9NX18 166 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 CXCL13O43927 109 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 ZNF32P17041 273 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 CHATP28329 748 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 OTX2P32243 289 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 NAAAQ02083 359 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 CLEC18BQ6UXF7 455 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 CDC6Q99741 560 aa9.69□□□□□ -0.86
MSH3-201ENST00000265081 BOKQ9UMX3 212 aaPredicted RBP9.69□□□□□ -0.86
MSH3-201ENST00000265081 ZNF250P15622 560 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 WIPI1Q5MNZ9 446 aaPredicted RBP9.68□□□□□ -0.86
MSH3-201ENST00000265081 TCEAL6Q6IPX3 200 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 AAED1Q7RTV5 226 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 COMMD2Q86X83 199 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 SKA3Q8IX90 412 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 MDS2Q8NDY4 140 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 TCEAL3Q969E4 200 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 SMOC1Q9H4F8 434 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 TMEM100Q9NV29 134 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 NOP16Q9Y3C1 178 aaKnown RBP9.68□□□□□ -0.86
MSH3-201ENST00000265081 DOCK10Q96BY6 2186 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 VPS13AQ96RL7 3174 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FGF16O43320 207 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 RLN2P04090 185 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 POC1AQ8NBT0 407 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 PIGTQ969N2 578 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 JSRP1Q96MG2 331 aaPredicted RBP9.68□□□□□ -0.86
MSH3-201ENST00000265081 NARFLQ9H6Q4 476 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 IGKV1D-8A0A087WSZ0 117 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A10PA6NDY2 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A18PA6NE21 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A16PA6NEW6 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A20PA6NIJ5 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A8PA6NJQ4 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A7PA6NKC0 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A22PA8MWA6 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A12PA8MX19 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A5PA8MXJ8 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A23PA8MXZ1 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A15PP0C7V4 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A13PP0C7W8 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A14PP0C7W9 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 FAM90A24PP0C7X0 464 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 ZSCAN4Q8NAM6 433 aaPredicted RBP9.68□□□□□ -0.86
MSH3-201ENST00000265081 BVESQ8NE79 360 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 OR5H2Q8NGV7 314 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 CYTL1Q9NRR1 136 aa9.68□□□□□ -0.86
MSH3-201ENST00000265081 IGKV1-12A0A0C4DH73 117 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 M0R296 226 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 XRCC2O43543 280 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 IGKV1D-12P01611 117 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 CYCSP99999 105 aaKnown RBP9.67□□□□□ -0.86
MSH3-201ENST00000265081 ANKRD55Q3KP44 614 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 ROBO4Q8WZ75 1007 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 SIGLEC12Q96PQ1 595 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 SHARPINQ9H0F6 387 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 FREM2Q5SZK8 3169 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 AVPR2P30518 371 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 SNU13P55769 128 aaKnown RBP9.67□□□□□ -0.86
MSH3-201ENST00000265081 ELP2Q6IA86 826 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 LIN54Q6MZP7 749 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 Q6ZPA2 131 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 SAXO1Q8IYX7 474 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 AQP10Q96PS8 301 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 METTL9Q9H1A3 318 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 ARRDC1-AS1Q9H2J1 176 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 IFNA6P05013 189 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 CTSDP07339 412 aaPredicted RBP9.67□□□□□ -0.86
MSH3-201ENST00000265081 BLVRBP30043 206 aaPredicted RBP9.67□□□□□ -0.86
MSH3-201ENST00000265081 SOX8P57073 446 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 PDSS1Q5T2R2 415 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 C11orf88Q6PI97 169 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 GPER1Q99527 375 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 TUBD1Q9UJT1 453 aa9.67□□□□□ -0.86
MSH3-201ENST00000265081 PSMB6P28072 239 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 FUT6P51993 359 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 CEACAM16Q2WEN9 425 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 GALNTL5Q7Z4T8 443 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 LRTM2Q8N967 370 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 CPEB3Q8NE35 698 aaKnown RBP9.66□□□□□ -0.86
MSH3-201ENST00000265081 SLC30A7Q8NEW0 376 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms