RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 SLC9A3R2Q15599 337 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 OR4D6Q8NGJ1 314 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 BORCS8Q96FH0 119 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 CFAP54Q96N23 3096 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 IGHV1-45A0A0A0MS14 117 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 MED19A0JLT2 244 aaPredicted RBP14.4□□□□□ -0.1
CTCF-201ENST00000264010 A6NLC8 198 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 PGA4P0DJD7 388 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 PGA3P0DJD8 388 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 CCNOP22674 350 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 BLVRBP30043 206 aaPredicted RBP14.4□□□□□ -0.1
CTCF-201ENST00000264010 HTR5AP47898 357 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 ECH1Q13011 328 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 CNN3Q15417 329 aaKnown RBP14.4□□□□□ -0.1
CTCF-201ENST00000264010 SLC25A53Q5H9E4 307 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 SOHLH1Q5JUK2 328 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 RTL6Q6ICC9 239 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 SLC16A14Q7RTX9 510 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 DTWD2Q8NBA8 298 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 OR9K2Q8NGE7 335 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 OR8B12Q8NGG6 310 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 HIST1H2AAQ96QV6 131 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 PIGLQ9Y2B2 252 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 CXorf65A6NEN9 183 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 GATCO43716 136 aaKnown RBP14.4□□□□□ -0.1
CTCF-201ENST00000264010 TRAF3IP2O43734 574 aaPredicted RBP14.4□□□□□ -0.1
CTCF-201ENST00000264010 IFNA21P01568 189 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 LIFP15018 202 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 TBPP20226 339 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 RFC3P40938 356 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 LSM6P62312 80 aaKnown RBP14.4□□□□□ -0.1
CTCF-201ENST00000264010 BAMBIQ13145 260 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 HNF4GQ14541 408 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 C1orf100Q5SVJ3 147 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 MRPL14Q6P1L8 145 aaKnown RBP14.4□□□□□ -0.1
CTCF-201ENST00000264010 MUC20Q8N307 709 aaPredicted RBP14.4□□□□□ -0.1
CTCF-201ENST00000264010 ADAT3Q96EY9 351 aaPredicted RBP14.4□□□□□ -0.1
CTCF-201ENST00000264010 OCSTAMPQ9BR26 566 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 ZPBPQ9BS86 351 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 PLEKHJ1Q9NW61 149 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 ZDBF2Q9HCK1 2354 aa14.4□□□□□ -0.1
CTCF-201ENST00000264010 FAM230AA0A1W2PPH8 454 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 LPCAT3Q6P1A2 487 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 OR2W3Q7Z3T1 314 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 CCDC54Q8NEL0 328 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 OR4S1Q8NGB4 309 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 TERB2Q8NHR7 220 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 POC1BQ8TC44 478 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 IGKV1D-43A0A0B4J1Z2 117 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 CXCL13O43927 109 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 GSTP1P09211 210 aaKnown RBP14.39□□□□□ -0.11
CTCF-201ENST00000264010 MTCP1P56278 107 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 CYCSP99999 105 aaKnown RBP14.39□□□□□ -0.11
CTCF-201ENST00000264010 PLEKHN1Q494U1 663 aaPredicted RBP14.39□□□□□ -0.11
CTCF-201ENST00000264010 SLC25A47Q6Q0C1 308 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 PUSL1Q8N0Z8 303 aaKnown RBP14.39□□□□□ -0.11
CTCF-201ENST00000264010 NEK7Q8TDX7 302 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 ASB13Q8WXK3 278 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 CMBLQ96DG6 245 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 MCRIP1C9JLW8 97 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 OR2C1O95371 312 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 F10P00742 488 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 MMP7P09237 267 aaPredicted RBP14.39□□□□□ -0.11
CTCF-201ENST00000264010 RBMXP38159 391 aaKnown RBP14.39□□□□□ -0.11
CTCF-201ENST00000264010 GPR137Q96N19 417 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 RBM14Q96PK6 669 aaKnown RBP14.39□□□□□ -0.11
CTCF-201ENST00000264010 ANGPTL4Q9BY76 406 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 FAM206AQ9NX38 181 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 ZNF107Q9UII5 783 aaPredicted RBP14.39□□□□□ -0.11
CTCF-201ENST00000264010 B3GALT1Q9Y5Z6 326 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 HS3ST3B1Q9Y662 390 aa14.39□□□□□ -0.11
CTCF-201ENST00000264010 PDGFBP01127 241 aaPredicted RBP14.38□□□□□ -0.11
CTCF-201ENST00000264010 TAS2R46P59540 309 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 LAMTOR1Q6IAA8 161 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 IL22RA1Q8N6P7 574 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 PIGTQ969N2 578 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 ATG101Q9BSB4 218 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 ZFP64Q9NPA5 681 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 IGLV3-32A0A0A0MS00 114 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 LMX1BO60663 402 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 ABCA11PQ4W5N1 156 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 TMEM255AQ5JRV8 349 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 OR2A2Q6IF42 318 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 PBDC1Q9BVG4 233 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 METTL9Q9H1A3 318 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 SMOC1Q9H4F8 434 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 PRDM6Q9NQX0 595 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 RHBDD3Q9Y3P4 386 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 FREM3P0C091 2139 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 CHD9Q3L8U1 2897 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 GABRR1P24046 479 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 SRD5A2P31213 254 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 HRH1P35367 487 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 THBS4P35443 961 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 CLEC1AQ8NC01 280 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 UTP23Q9BRU9 249 aaKnown RBP14.38□□□□□ -0.11
CTCF-201ENST00000264010 TMPRSS5Q9H3S3 457 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 LHFPL6Q9Y693 200 aa14.38□□□□□ -0.11
CTCF-201ENST00000264010 PI4KAP42356 2102 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms