RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 HS3ST3A1Q9Y663 406 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 NSG1A0A0A6YYJ2 146 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 FOXI3A8MTJ6 420 aaPredicted RBP10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 RPL36A-HNRNPH2H7BZ11 118 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 ST8SIA3O43173 380 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 HPNP05981 417 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 ZNF133P52736 654 aaPredicted RBP10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 POU3F1Q03052 451 aaPredicted RBP10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 GNMTQ14749 295 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 LRTM2Q8N967 370 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 ST8SIA1Q92185 356 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 FGF14Q92915 247 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 SHDQ96IW2 340 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 TM2D1Q9BX74 207 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 ZNF701Q9NV72 531 aaPredicted RBP10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 FREM3P0C091 2139 aa10.9□□□□□ -0.66
CHMP2B-201ENST00000263780 LY86O95711 162 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 PTBP3O95758 552 aaKnown RBP10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 DDAH2O95865 285 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 HEXBP07686 556 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 CCL5P13501 91 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 HOXB2P14652 356 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 SERPINA2P20848 420 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 FHITP49789 147 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 RSU1Q15404 277 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 ABCA11PQ4W5N1 156 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 PLXDC2Q6UX71 529 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 METTL27Q8N6F8 245 aaPredicted RBP10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 APCDD1LQ8NCL9 501 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 OR10S1Q8NGN2 331 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 RAB39BQ96DA2 213 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 TVP23CQ96ET8 276 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 PIGQQ9BRB3 760 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 PRDM13Q9H4Q3 707 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 NAA60Q9H7X0 242 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 LANCL2Q9NS86 450 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 MMP24Q9Y5R2 645 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 IGKV1D-43A0A0B4J1Z2 117 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 A0A1W2PP11 408 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 B4DEV8 164 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 SLC31A2O15432 143 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 HSPA12AO43301 675 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 APOBEC1P41238 236 aaKnown RBP10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 TAS2R60P59551 318 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 ELOBQ15370 118 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 TMEM182Q6ZP80 229 aaPredicted RBP10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 HSD17B11Q8NBQ5 300 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 OR8B12Q8NGG6 310 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 M1APQ8TC57 530 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 SSC4DQ8WTU2 575 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 DDIT4LQ96D03 193 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 FAM71F1Q96KD3 344 aaPredicted RBP10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 SYT3Q9BQG1 590 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 KIAA1456Q9P272 454 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 KLHL13Q9P2N7 655 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 COPS7AQ9UBW8 275 aa10.89□□□□□ -0.67
CHMP2B-201ENST00000263780 FAM230AA0A1W2PPH8 454 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 RAB4BP61018 213 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 TMEM187Q14656 261 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 KISS1Q15726 138 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 TTLL10Q6ZVT0 673 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 SLC35E3Q7Z769 313 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 LGI3Q8N145 548 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 SLC38A9Q8NBW4 561 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 HPSE2Q8WWQ2 592 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 OR5H15A6NDH6 313 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 HSPB1P04792 205 aaKnown RBP10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF728P0DKX0 622 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 CTSEP14091 401 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 DDTP30046 118 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 SFTPDP35247 375 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 PPP1CCP36873 323 aaKnown RBP10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 MNX1P50219 401 aaPredicted RBP10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 BIDP55957 195 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 PIGPP57054 158 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF121P58317 390 aaPredicted RBP10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 GABREP78334 506 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 FBXW12Q6X9E4 464 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 SLC16A14Q7RTX9 510 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 RNF144BQ7Z419 303 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF429Q86V71 674 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST3H2BBQ8N257 126 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 NIPSNAP3BQ9BS92 247 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 SH3BGRL3Q9H299 93 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 NECAP2Q9NVZ3 263 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 MED29Q9NX70 200 aa10.88□□□□□ -0.67
CHMP2B-201ENST00000263780 A0A1W2PQF6 199 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 CDC14CA4D256 554 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST1H2BKO60814 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 C1QL1O75973 258 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST1H2BJP06899 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 OR5H8P0DN80 308 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST1H2BOP23527 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST1H2BBP33778 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 GLIPR1P48060 266 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 GABRA4P48169 554 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST1H2BDP58876 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST1H2BCP62807 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 GRB2P62993 217 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms