RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PCBD1P61457 104 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 LCN6P62502 163 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 BAXQ07812 192 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 MALLQ13021 153 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 IGSF11Q5DX21 431 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF808Q8N4W9 903 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF610Q8N9Z0 462 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 GJC3Q8NFK1 279 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 RXFP4Q8TDU9 374 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 C8orf44Q96CB5 159 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ADOQ96SZ5 270 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 MS4A7Q9GZW8 240 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 FN3KRPQ9HA64 309 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF160Q9HCG1 818 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TMEM9BQ9NQ34 198 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 PADI1Q9ULC6 663 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 MMP17Q9ULZ9 603 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 COA3Q9Y2R0 106 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 KLHDC2Q9Y2U9 406 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 COL6A3P12111 3177 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TRAV14DV4A0A0A6YYC5 116 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 MSTNO14793 375 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 EFSO43281 561 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SPP1P10451 314 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 DTYMKP23919 212 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 BLVRBP30043 206 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 KIR3DL2P43630 455 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SHBQ15464 509 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 MESTQ5EB52 335 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 KMT5CQ86Y97 462 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF721Q8TF20 911 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TSACCQ96A04 125 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 MRGPRX4Q96LA9 322 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF75AQ96N20 296 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SSX3Q99909 188 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 CMSS1Q9BQ75 279 aaKnown RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ST6GALNAC5Q9BVH7 336 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TPSD1Q9BZJ3 242 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 CTDSP1Q9GZU7 261 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 RIMS4Q9H426 269 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 RNF122Q9H9V4 155 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 KLRF1Q9NZS2 232 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 CACFD1Q9UGQ2 172 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 GPR132Q9UNW8 380 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 WDR87Q6ZQQ6 2873 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 FOXI3A8MTJ6 420 aaPredicted RBP3.67□□□□□ -1.82
UBE4A-201ENST00000252108 DUX1O43812 170 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 TSPAN2O60636 221 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF217O75362 1048 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 KNG1P01042 644 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 ICAM2P13598 275 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 POU3F2P20265 443 aaPredicted RBP3.67□□□□□ -1.82
UBE4A-201ENST00000252108 ENPP1P22413 925 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 SNRPEP62304 92 aaKnown RBP3.67□□□□□ -1.82
UBE4A-201ENST00000252108 HSF1Q00613 529 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 SRSF5Q13243 272 aaKnown RBP3.67□□□□□ -1.82
UBE4A-201ENST00000252108 HNF4GQ14541 408 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 C10orf91Q5T1B1 145 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF100Q8IYN0 542 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 PATE1Q8WXA2 126 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 MALSU1Q96EH3 234 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 ULBP3Q9BZM4 244 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 SLC26A1Q9H2B4 701 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 METTL7AQ9H8H3 244 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 VSIG4Q9Y279 399 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 NOSIPQ9Y314 301 aaKnown RBP3.67□□□□□ -1.82
UBE4A-201ENST00000252108 KIAA0100Q14667 2235 aaKnown RBP3.67□□□□□ -1.82
UBE4A-201ENST00000252108 WDFY4Q6ZS81 3184 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 A0A087WZY1 265 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 IGLV3-32A0A0A0MS00 114 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 A0A1B0GW64 132 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 H7C1Q1 480 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 DCTN6O00399 190 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 SMAD9O15198 467 aaKnown RBP3.67□□□□□ -1.82
UBE4A-201ENST00000252108 DXOO77932 396 aaKnown RBP3.67□□□□□ -1.82
UBE4A-201ENST00000252108 CYC1P08574 325 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 FGF7P21781 194 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 ANOS1P23352 680 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 NPY4RP50391 375 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 HBG1P69891 147 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 HBG2P69892 147 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 QRFPP83859 136 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 CD226Q15762 336 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 RNF133Q8WVZ7 376 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 BORCS8Q96FH0 119 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 LURAP1Q96LR2 239 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 TAAR9Q96RI9 348 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 ZPBPQ9BS86 351 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 LRRC61Q9BV99 259 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 PLEKHF2Q9H8W4 249 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 CUTCQ9NTM9 273 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 PTRH2Q9Y3E5 179 aaKnown RBP3.67□□□□□ -1.82
UBE4A-201ENST00000252108 FBXO7Q9Y3I1 522 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 KIR2DS1A0A191URI9 304 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 RNF212BA8MTL3 300 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 MKRN2OSH3BPM6 223 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 UBE2CO00762 179 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 CDS2O95674 445 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 TMEM225BP0DP42 221 aa3.67□□□□□ -1.82
UBE4A-201ENST00000252108 LYL1P12980 280 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms