RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PMS2P1A4D2B8 440 aa22.32■■□□□ 1.16
RAB40C-201ENST00000248139 ONECUT2O95948 504 aa22.32■■□□□ 1.16
RAB40C-201ENST00000248139 TPT1P13693 172 aaKnown RBP22.32■■□□□ 1.16
RAB40C-201ENST00000248139 THBS4P35443 961 aa22.32■■□□□ 1.16
RAB40C-201ENST00000248139 ZNF169Q14929 603 aaPredicted RBP22.32■■□□□ 1.16
RAB40C-201ENST00000248139 ACTBL2Q562R1 376 aa22.32■■□□□ 1.16
RAB40C-201ENST00000248139 AKR7LQ8NHP1 331 aa22.32■■□□□ 1.16
RAB40C-201ENST00000248139 ALKBH3Q96Q83 286 aaPredicted RBP22.32■■□□□ 1.16
RAB40C-201ENST00000248139 ZNF2Q9BSG1 426 aaPredicted RBP22.32■■□□□ 1.16
RAB40C-201ENST00000248139 F8VVB4 439 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 F8VWA3 439 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 SERPINA5P05154 406 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 CTSSP25774 331 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 SSR4P51571 173 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 C10orf128Q5T292 105 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 HAS2Q92819 552 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 NECAB3Q96P71 396 aaPredicted RBP22.31■■□□□ 1.16
RAB40C-201ENST00000248139 ANGPTL4Q9BY76 406 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 NKX6-2Q9C056 277 aaPredicted RBP22.31■■□□□ 1.16
RAB40C-201ENST00000248139 LIME1Q9H400 295 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 RAB18Q9NP72 206 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 TRBV6-7A0A0A0MS04 114 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 FGF5P12034 268 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 RCC1P18754 421 aaPredicted RBP22.31■■□□□ 1.16
RAB40C-201ENST00000248139 Q7L0L9 218 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 RPS19BP1Q86WX3 136 aaKnown RBP22.31■■□□□ 1.16
RAB40C-201ENST00000248139 SEMA6DQ8NFY4 1073 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 CRLF2Q9HC73 371 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 HPF1Q9NWY4 346 aa22.31■■□□□ 1.16
RAB40C-201ENST00000248139 IGKV1-27A0A075B6S5 117 aa22.3■■□□□ 1.16
RAB40C-201ENST00000248139 CEACAM18A8MTB9 384 aa22.3■■□□□ 1.16
RAB40C-201ENST00000248139 PDGFBP01127 241 aaPredicted RBP22.3■■□□□ 1.16
RAB40C-201ENST00000248139 DSCR4P56555 118 aaPredicted RBP22.3■■□□□ 1.16
RAB40C-201ENST00000248139 CLEC9AQ6UXN8 241 aa22.3■■□□□ 1.16
RAB40C-201ENST00000248139 PIGMQ9H3S5 423 aa22.3■■□□□ 1.16
RAB40C-201ENST00000248139 PILRBQ9UKJ0 227 aa22.3■■□□□ 1.16
RAB40C-201ENST00000248139 LOC102723996A0A087X1L8 192 aa22.3■■□□□ 1.16
RAB40C-201ENST00000248139 ICAM2P13598 275 aa22.3■■□□□ 1.16
RAB40C-201ENST00000248139 CYCSP99999 105 aaKnown RBP22.3■■□□□ 1.16
RAB40C-201ENST00000248139 OR2A2Q6IF42 318 aa22.3■■□□□ 1.16
RAB40C-201ENST00000248139 PLXDC2Q6UX71 529 aa22.3■■□□□ 1.16
RAB40C-201ENST00000248139 TSNAXQ99598 290 aaKnown RBP22.3■■□□□ 1.16
RAB40C-201ENST00000248139 CCDC187A0A096LP49 1063 aa22.29■■□□□ 1.16
RAB40C-201ENST00000248139 A0A0U1RQV5 110 aa22.29■■□□□ 1.16
RAB40C-201ENST00000248139 B4GALT1P15291 398 aa22.29■■□□□ 1.16
RAB40C-201ENST00000248139 PRSS54Q6PEW0 395 aa22.29■■□□□ 1.16
RAB40C-201ENST00000248139 MAML2Q8IZL2 1156 aaPredicted RBP22.29■■□□□ 1.16
RAB40C-201ENST00000248139 FOXD3Q9UJU5 478 aaPredicted RBP22.29■■□□□ 1.16
RAB40C-201ENST00000248139 NCKAP5O14513 1909 aa22.29■■□□□ 1.16
RAB40C-201ENST00000248139 SP6Q3SY56 376 aa22.29■■□□□ 1.16
RAB40C-201ENST00000248139 PUSL1Q8N0Z8 303 aaKnown RBP22.29■■□□□ 1.16
RAB40C-201ENST00000248139 FAM96BQ9Y3D0 163 aa22.29■■□□□ 1.16
RAB40C-201ENST00000248139 PCDHGA1Q9Y5H4 931 aa22.29■■□□□ 1.16
RAB40C-201ENST00000248139 URB1O60287 2271 aaKnown RBP22.29■■□□□ 1.16
RAB40C-201ENST00000248139 TMEM218A2RU14 115 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 FGF16O43320 207 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 RFPL3SP0C7P2 107 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 CPT2P23786 658 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 TAS2R46P59540 309 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 SLC30A7Q8NEW0 376 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 HRH4Q9H3N8 390 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 SHANK1Q9Y566 2161 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 AHCTF1Q8WYP5 2266 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 NSG1A0A0A6YYJ2 146 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 FIGNL2A6NMB9 653 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 OTX1P32242 354 aaPredicted RBP22.28■■□□□ 1.16
RAB40C-201ENST00000248139 CBX5P45973 191 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 RPL7L1Q6DKI1 246 aaKnown RBP22.28■■□□□ 1.16
RAB40C-201ENST00000248139 POC1AQ8NBT0 407 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 OR4A4PQ8NGN8 299 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 FGFBP3Q8TAT2 258 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 STOML3Q8TAV4 291 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 PP6455Q8WZ26 134 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 TOMM40LQ969M1 308 aa22.28■■□□□ 1.16
RAB40C-201ENST00000248139 CPNE2Q96FN4 548 aaPredicted RBP22.28■■□□□ 1.16
RAB40C-201ENST00000248139 ZNF705EA8MWA4 302 aaPredicted RBP22.27■■□□□ 1.16
RAB40C-201ENST00000248139 EIF1BO60739 113 aaKnown RBP22.27■■□□□ 1.16
RAB40C-201ENST00000248139 IGHV3-9P01782 118 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 LCATP04180 440 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 CTRB1P17538 263 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 CTRB2Q6GPI1 263 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 C2orf50Q96LR7 162 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 WDR54Q9H977 334 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 FAM186AA6NE01 2351 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 ATG12O94817 140 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 FAM157CP0CG43 387 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 PMS2CLQ68D20 193 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 NAT6Q93015 286 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 NAA11Q9BSU3 229 aaPredicted RBP22.27■■□□□ 1.16
RAB40C-201ENST00000248139 SMIM3Q9BZL3 60 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 ZNF700Q9H0M5 742 aa22.27■■□□□ 1.16
RAB40C-201ENST00000248139 SGCEO43556 437 aa22.26■■□□□ 1.15
RAB40C-201ENST00000248139 RBM39Q14498 530 aaKnown RBP22.26■■□□□ 1.15
RAB40C-201ENST00000248139 IAH1Q2TAA2 248 aaPredicted RBP22.26■■□□□ 1.15
RAB40C-201ENST00000248139 PDSS1Q5T2R2 415 aa22.26■■□□□ 1.15
RAB40C-201ENST00000248139 TSPO2Q5TGU0 170 aa22.26■■□□□ 1.15
RAB40C-201ENST00000248139 RPUSD3Q6P087 351 aaKnown RBP22.26■■□□□ 1.15
RAB40C-201ENST00000248139 SPTSSAQ969W0 71 aa22.26■■□□□ 1.15
RAB40C-201ENST00000248139 REEP6Q96HR9 211 aa22.26■■□□□ 1.15
RAB40C-201ENST00000248139 SLC6A15Q9H2J7 730 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms