RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CTDSPLO15194 276 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 HMGB3O15347 200 aaKnown RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 LYPD3O95274 346 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 RCC1P18754 421 aaPredicted RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 ELLP55199 621 aaPredicted RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 PBDC1Q9BVG4 233 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 PRMT8Q9NR22 394 aaPredicted RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 FAM212BQ9NTI7 297 aaPredicted RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 GLS2Q9UI32 602 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 CD300LBA8K4G0 201 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 SNAPC5O75971 98 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 MST1P26927 711 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 IDH3GP51553 393 aaPredicted RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 USF2Q15853 346 aaPredicted RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 SOHLH1Q5JUK2 328 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 BPHLQ86WA6 291 aaPredicted RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 C17orf78Q8N4C9 275 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 ZNF808Q8N4W9 903 aaPredicted RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 SLC25A43Q8WUT9 341 aaPredicted RBP12.12□□□□□ -0.47
NCLN-201ENST00000246117 GFI1Q99684 422 aa12.12□□□□□ -0.47
NCLN-201ENST00000246117 LIMK1P53667 647 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 DMWDQ09019 674 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 OR5M9Q8NGP3 310 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 ADIPOR1Q96A54 375 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 DUSP13Q9UII6 198 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 PPP1R3CQ9UQK1 317 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 IGHV3-7P01780 117 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 LTBRP36941 435 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 ID4P47928 161 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 GGTLC2Q14390 218 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 EDDM3AQ14507 147 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 ZNF660Q6AZW8 331 aaPredicted RBP12.11□□□□□ -0.47
NCLN-201ENST00000246117 SPINK14Q6IE38 97 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 RHBDD2Q6NTF9 364 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 LPCAT3Q6P1A2 487 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 LCN15Q6UWW0 184 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 OR2G3Q8NGZ4 309 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 MAFAQ8NHW3 353 aaPredicted RBP12.11□□□□□ -0.47
NCLN-201ENST00000246117 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
NCLN-201ENST00000246117 NMNAT2Q9BZQ4 307 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 RHOFQ9HBH0 211 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 FAM74A7A6NL05 159 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 IAPPP10997 89 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 GPM6AP51674 278 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 FAM74A3Q4VXF1 159 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 GCNT2Q8N0V5 402 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 SCARF2Q96GP6 870 aaPredicted RBP12.11□□□□□ -0.47
NCLN-201ENST00000246117 AMDHD2Q9Y303 409 aa12.11□□□□□ -0.47
NCLN-201ENST00000246117 TXNDC12O95881 172 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 CPN1P15169 458 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 PLAURQ03405 335 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 COL19A1Q14993 1142 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 RHEBQ15382 184 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 ACTBL2Q562R1 376 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 ZNF709Q8N972 641 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 FBXO17Q96EF6 278 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 NECAP2Q9NVZ3 263 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 P4HTMQ9NXG6 502 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 MTCH2Q9Y6C9 303 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 LINC00862A6NCI5 91 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 MS4A18H0YCH9 400 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 SIRPB1O00241 398 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 SULT1C2O00338 296 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 MSTNO14793 375 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 ST8SIA3O43173 380 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 C1QL1O75973 258 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 MS4A18Q3C1V0 323 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 C4orf17Q53FE4 359 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 RTN4RL2Q86UN3 420 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 OR9K2Q8NGE7 335 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 ABHD3Q8WU67 409 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 TTC9Q92623 222 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 HGDQ93099 445 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 ZNF501Q96CX3 271 aaPredicted RBP12.1□□□□□ -0.47
NCLN-201ENST00000246117 SOSTQ9BQB4 213 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 PLSCR5A0PG75 271 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 TSPAN2O60636 221 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 ZP3P21754 424 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 ECH1Q13011 328 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 CDCP2Q5VXM1 449 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 BVESQ8NE79 360 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 C2orf50Q96LR7 162 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 WDR13Q9H1Z4 485 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 PRR14LQ5THK1 2151 aa12.1□□□□□ -0.47
NCLN-201ENST00000246117 TRBV5-5A0A0J9YX44 114 aa12.09□□□□□ -0.47
NCLN-201ENST00000246117 SMAD4Q13485 552 aaKnown RBP12.09□□□□□ -0.47
NCLN-201ENST00000246117 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
NCLN-201ENST00000246117 RAB11FIP2Q7L804 512 aa12.09□□□□□ -0.47
NCLN-201ENST00000246117 D2HGDHQ8N465 521 aa12.09□□□□□ -0.47
NCLN-201ENST00000246117 HAS2Q92819 552 aa12.09□□□□□ -0.47
NCLN-201ENST00000246117 ZNF285Q96NJ3 590 aa12.09□□□□□ -0.47
NCLN-201ENST00000246117 TIMP4Q99727 224 aa12.09□□□□□ -0.47
NCLN-201ENST00000246117 UTP23Q9BRU9 249 aaKnown RBP12.09□□□□□ -0.47
NCLN-201ENST00000246117 NPIPB9F8W1W9 429 aa12.09□□□□□ -0.47
NCLN-201ENST00000246117 GEMIN2O14893 280 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms