RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 PRODH2Q9UF12 536 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 IGKV1D-43A0A0B4J1Z2 117 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 H3BML4 177 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 PLRG1O43660 514 aaKnown RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 TCF21O43680 179 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 PGA3P0DJD8 388 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 CTSEP14091 401 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 ZNF93P35789 620 aaPredicted RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 PPP1CCP36873 323 aaKnown RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 ERVFRD-1P60508 538 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 HHEXQ03014 270 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 ZNF248Q8NDW4 579 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 SLC26A10Q8NG04 563 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 OR51E1Q8TCB6 317 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 ELSPBP1Q96BH3 223 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 NMES1Q9C002 83 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 POMT1Q9Y6A1 747 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 KLF8O95600 359 aaPredicted RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 SCGB1D1O95968 90 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 MBPP02686 304 aaPredicted RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 MELTFP08582 738 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 GP1BBP13224 206 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 ALDH3B1P43353 468 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 CSNK2A1P68400 391 aaPredicted RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 HLA-DQA1Q5Y7H0 255 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 TMEM182Q6ZP80 229 aaPredicted RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 MRPL41Q8IXM3 137 aaKnown RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 GPR137CQ8N3F9 429 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 ZDHHC22Q8N966 263 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 CSNK2A3Q8NEV1 391 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 OR6X1Q8NH79 312 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 C8orf44Q96CB5 159 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 VDAC3Q9Y277 283 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 MEMO1Q9Y316 297 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 R4GMQ9 66 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 SHISA8B8ZZ34 492 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 SCGNO76038 276 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 JTBO76095 146 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 DLK1P80370 383 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 POU3F1Q03052 451 aaPredicted RBP12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 KLHL24Q6TFL4 600 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 ZNF440Q8IYI8 595 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 OR5H2Q8NGV7 314 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 C19orf12Q9NSK7 152 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 EHFQ9NZC4 300 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 BRWD1Q9NSI6 2320 aa12.52□□□□□ -0.4
PCDHB3-201ENST00000231130 ELOA3CA0A087WX78 387 aaPredicted RBP12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 FAM157AC9JC47 383 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF878C9JN71 531 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 SLC33A1O00400 549 aaPredicted RBP12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 IL2RAP01589 272 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF20P17024 532 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 CARD17Q5XLA6 110 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 C1QL4Q86Z23 238 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 PLPP5Q8NEB5 264 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 MUCL1Q96DR8 90 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 ARHGAP5-AS1Q96IT6 56 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 FAM210BQ96KR6 192 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 FLVCR1Q9Y5Y0 555 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF217O75362 1048 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 FBXW4P57775 412 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 RSPO4Q2I0M5 234 aaPredicted RBP12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 ANKRD39Q53RE8 183 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 EMC4Q5J8M3 183 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 ABHD12BQ7Z5M8 362 aaPredicted RBP12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 OR13H1Q8NG92 308 aa12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 NOL4LQ96MY1 436 aaPredicted RBP12.52□□□□□ -0.41
PCDHB3-201ENST00000231130 SDK2Q58EX2 2172 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 OR3A4PP47883 348 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 SRSF4Q08170 494 aaKnown RBP12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 SLC22A25Q6T423 547 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 SLC35G3Q8N808 338 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 M1APQ8TC57 530 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 THRSPQ92748 146 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 TMEM230Q96A57 120 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 WFIKKN1Q96NZ8 548 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 TRAV36DV7A0A075B6V5 113 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 TMED7-TICAM2A0A0A6YYA0 188 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 IGLV1-36A0A0B4J1U3 117 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 NPIPA5E9PKD4 350 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 XRCC2O43543 280 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 IGFBP3P17936 291 aaPredicted RBP12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 SP6Q3SY56 376 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 FAM185AQ8N0U4 392 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 ELOVL1Q9BW60 279 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 GPR87Q9BY21 358 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 G6PC2Q9NQR9 355 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 NPIPA1Q9UND3 350 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 RHBDD3Q9Y3P4 386 aa12.51□□□□□ -0.41
PCDHB3-201ENST00000231130 BORCS7-ASMTA0A0B4J1R7 106 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF705FA8MVS1 300 aaPredicted RBP12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 C9J4A7 227 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 DLEU1O43261 78 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 BGLAPP02818 100 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF705DP0CH99 300 aaPredicted RBP12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 ZNF705BP0CI00 300 aaPredicted RBP12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 ELOBQ15370 118 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 RNF151Q2KHN1 245 aa12.5□□□□□ -0.41
PCDHB3-201ENST00000231130 C2orf50Q96LR7 162 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms