RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 C1orf100Q5SVJ3 147 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 TMEM244Q5VVB8 128 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR1L3Q8NH93 324 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 NICN1Q9BSH3 213 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 BCO1Q9HAY6 547 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 PARPBPQ9NWS1 579 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 CACFD1Q9UGQ2 172 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 COLQQ9Y215 455 aaPredicted RBP8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 LOC390937A0A1W2PQ73 354 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 A6NNC1 897 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 GEMIN2O14893 280 aaKnown RBP8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 IGHV2-5P01817 119 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 CRHP06850 196 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 PAX6P26367 422 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 DHPSP49366 369 aaPredicted RBP8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 CSNK1EP49674 416 aaKnown RBP8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 DVL1P1P54792 670 aaPredicted RBP8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 LSM6P62312 80 aaKnown RBP8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 ACY1Q03154 408 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 RAB32Q13637 225 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF345Q14585 488 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 GRINAQ7Z429 371 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 LYG2Q86SG7 212 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLC25A42Q86VD7 318 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 SUMF2Q8NBJ7 301 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 RCL1Q9Y2P8 373 aaKnown RBP8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 MMACHCQ9Y4U1 282 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 H3BML4 177 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 TTRP02766 147 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 CRABP1P29762 137 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR1D5P58170 312 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 BPIFB3P59826 476 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 UBE2KP61086 200 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 MST1LQ2TV78 715 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR1N1Q8NGS0 311 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR1J1Q8NGS3 322 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 FAM213BQ8TBF2 198 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 ASB10Q8WXI3 467 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 PACRGQ96M98 296 aaPredicted RBP8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 CNTNAP3Q9BZ76 1288 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 VN1R1Q9GZP7 353 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 CHST5Q9GZS9 411 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 CBLN4Q9NTU7 201 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 MYO7BQ6PIF6 2116 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 CELSR3Q9NYQ7 3312 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 A0A1W2PQD3 144 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 MEGF11A6BM72 1044 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 ISG15P05161 165 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 H2BFMP0C1H6 154 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLC2A1P11166 492 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 FOLR1P15328 257 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 HOXA5P20719 270 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 APLNRP35414 380 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 LTBRP36941 435 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 RPL29P47914 159 aaKnown RBP8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 FBXW4P57775 412 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 STARD6P59095 220 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 CFHR1Q03591 330 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 GGNBP1Q5YKI7 109 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 COX15Q7KZN9 410 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 EDAQ92838 391 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLCO5A1Q9H2Y9 848 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 MYOZ1Q9NP98 299 aaPredicted RBP8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 SUSD2Q9UGT4 822 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 A0A1W2PP11 408 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 MFNGO00587 321 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 EFSO43281 561 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 FGF16O43320 207 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 PPIHO43447 177 aaKnown RBP8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 SOD3P08294 240 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 CD79AP11912 226 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF239Q16600 458 aaKnown RBP8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF705AQ6ZN79 300 aaPredicted RBP8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF248Q8NDW4 579 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR10S1Q8NGN2 331 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 KCNK17Q96T54 332 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 CHD3Q12873 2000 aaKnown RBP8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR5H15A6NDH6 313 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR5H1A6NKK0 313 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 NPIPA5E9PKD4 350 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 H0YIZ8 118 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 IGHMP01871 453 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLC25A4P12235 298 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 QRFPP83859 136 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 SRSF4Q08170 494 aaKnown RBP8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 HAGHQ16775 308 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 RALGAPA1Q6GYQ0 2036 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 OIT3Q8WWZ8 545 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 C11orf40Q8WZ69 217 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 DAZLQ92904 295 aaKnown RBP8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 WFIKKN1Q96NZ8 548 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 PRRT1Q99946 306 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 OPN3Q9H1Y3 402 aaPredicted RBP8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 RNF122Q9H9V4 155 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 FAM206AQ9NX38 181 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 COPS7AQ9UBW8 275 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 RAB22AQ9UL26 194 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 HSF4Q9ULV5 492 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms