RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TGIF2LYQ8IUE0 185 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 OR5D18Q8NGL1 313 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 ZNF420Q8TAQ5 688 aaPredicted RBP23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 OR51I2Q9H344 312 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 GCM1Q9NP62 436 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 ZNF701Q9NV72 531 aaPredicted RBP23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 PPP1R3CQ9UQK1 317 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 CACNG2Q9Y698 323 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 CSMD2Q7Z408 3487 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 GABARAPO95166 117 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 PTBP3O95758 552 aaKnown RBP23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 EFNA4P52798 201 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 ATP5J2P56134 94 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 NCS1P62166 190 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 KISS1Q15726 138 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 FAM76BQ5HYJ3 339 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 ZNF826PQ6ZT77 177 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 CALHM1Q8IU99 346 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 SCCPDHQ8NBX0 429 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 GPER1Q99527 375 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 C1orf123Q9NWV4 160 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 AK6Q9Y3D8 172 aaKnown RBP23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 IGHV1-69-2A0A0G2JMI3 117 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 SMIM30A4D0T7 59 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 LYNX1G3V0Z9 82 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 CDIPTO14735 213 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 LYNX1P0DP58 116 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 GATA4P43694 442 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 PTH2RP49190 550 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 POU3F4P49335 361 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 VBP1P61758 197 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 ZNF573Q86YE8 665 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 JAGN1Q8N5M9 183 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 FN3KRPQ9HA64 309 aa23.03■■□□□ 1.28
CHMP4B-201ENST00000217402 TRAV1-2A0A0B4J238 106 aa23.02■■□□□ 1.28
CHMP4B-201ENST00000217402 hCG_1807616A0A1W2PRN6 198 aa23.02■■□□□ 1.28
CHMP4B-201ENST00000217402 F12P00748 615 aaPredicted RBP23.02■■□□□ 1.28
CHMP4B-201ENST00000217402 ALDOBP05062 364 aa23.02■■□□□ 1.28
CHMP4B-201ENST00000217402 DAOP14920 347 aa23.02■■□□□ 1.28
CHMP4B-201ENST00000217402 ZNF93P35789 620 aaPredicted RBP23.02■■□□□ 1.28
CHMP4B-201ENST00000217402 CTF1Q16619 201 aa23.02■■□□□ 1.28
CHMP4B-201ENST00000217402 CDH24Q86UP0 819 aa23.02■■□□□ 1.28
CHMP4B-201ENST00000217402 NKAIN3Q8N8D7 197 aa23.02■■□□□ 1.28
CHMP4B-201ENST00000217402 PMELP40967 661 aa23.01■■□□□ 1.27
CHMP4B-201ENST00000217402 CRIP3Q6Q6R5 217 aa23.01■■□□□ 1.27
CHMP4B-201ENST00000217402 C11orf53Q8IXP5 236 aa23.01■■□□□ 1.27
CHMP4B-201ENST00000217402 CCL17Q92583 94 aa23.01■■□□□ 1.27
CHMP4B-201ENST00000217402 GFI1Q99684 422 aa23.01■■□□□ 1.27
CHMP4B-201ENST00000217402 TLNRD1Q9H1K6 362 aa23.01■■□□□ 1.27
CHMP4B-201ENST00000217402 MEGF11A6BM72 1044 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 SDC2P34741 201 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 MTNR1BP49286 362 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 MXD1Q05195 221 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 DEFB113Q30KQ7 82 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 AQP3Q92482 292 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 YIPF5Q969M3 257 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 CPNE2Q96FN4 548 aaPredicted RBP23■■□□□ 1.27
CHMP4B-201ENST00000217402 GSX2Q9BZM3 304 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 FAM192AQ9GZU8 254 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 BEX4Q9NWD9 120 aaPredicted RBP23■■□□□ 1.27
CHMP4B-201ENST00000217402 DCAF16Q9NXF7 216 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 ANKRD17O75179 2603 aaKnown RBP23■■□□□ 1.27
CHMP4B-201ENST00000217402 NAV2Q8IVL1 2488 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 J3QT63 122 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 SPRY1O43609 319 aaPredicted RBP23■■□□□ 1.27
CHMP4B-201ENST00000217402 SYNGR1O43759 233 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 SSX4O60224 188 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 RHBDL1O75783 438 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 COL8A2P25067 703 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 OR10A3P58181 314 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 CARTPTQ16568 116 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 RDH5Q92781 318 aa23■■□□□ 1.27
CHMP4B-201ENST00000217402 METTL17Q9H7H0 456 aaPredicted RBP23■■□□□ 1.27
CHMP4B-201ENST00000217402 CHD3Q12873 2000 aaKnown RBP23■■□□□ 1.27
CHMP4B-201ENST00000217402 FLNBO75369 2602 aaKnown RBP22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 CCDC160A6NGH7 325 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 PAX1P15863 534 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 OR3A4PP47883 348 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 HOXA4Q00056 320 aaPredicted RBP22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 HFEQ30201 348 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 WDR82Q6UXN9 313 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 SLC25A26Q70HW3 274 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 NINJ1Q92982 152 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 ERGIC1Q969X5 290 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 CEPT1Q9Y6K0 416 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 ITPR2Q14571 2701 aa22.99■■□□□ 1.27
CHMP4B-201ENST00000217402 TRIM64BA6NI03 449 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 PDCD5O14737 125 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 NOL3O60936 208 aaKnown RBP22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 CDRT1O95170 752 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 CLEC2LP0C7M8 214 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 RAB3BP20337 219 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 GLT8D1Q68CQ7 371 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 BATF2Q8N1L9 274 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 OR11L1Q8NGX0 322 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 RAB2BQ8WUD1 216 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 TNFAIP8L1Q8WVP5 186 aa22.98■■□□□ 1.27
CHMP4B-201ENST00000217402 ANGPTL7O43827 346 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 CYB5R3P00387 301 aaPredicted RBP22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 TMBIM6P55061 237 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms