RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 IAH1Q2TAA2 248 aaPredicted RBP11.65□□□□□ -0.54
SRP54-201ENST00000216774 RPL7L1Q6DKI1 246 aaKnown RBP11.65□□□□□ -0.54
SRP54-201ENST00000216774 FNDC9Q8TBE3 224 aa11.65□□□□□ -0.54
SRP54-201ENST00000216774 ZNF775Q96BV0 537 aaPredicted RBP11.65□□□□□ -0.54
SRP54-201ENST00000216774 ZFP57Q9NU63 452 aa11.65□□□□□ -0.54
SRP54-201ENST00000216774 ZNF701Q9NV72 531 aaPredicted RBP11.65□□□□□ -0.54
SRP54-201ENST00000216774 MCTS1Q9ULC4 181 aaKnown RBP11.65□□□□□ -0.54
SRP54-201ENST00000216774 POMT1Q9Y6A1 747 aa11.65□□□□□ -0.54
SRP54-201ENST00000216774 VCANP13611 3396 aa11.65□□□□□ -0.54
SRP54-201ENST00000216774 DHRS7CA6NNS2 312 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 JTBO76095 146 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 MUC1P15941 1255 aaPredicted RBP11.65□□□□□ -0.55
SRP54-201ENST00000216774 RFC3P40938 356 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 LPAR6P43657 344 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 HOXA1P49639 335 aaPredicted RBP11.65□□□□□ -0.55
SRP54-201ENST00000216774 SMCO1Q147U7 214 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 RSPO1Q2MKA7 263 aaPredicted RBP11.65□□□□□ -0.55
SRP54-201ENST00000216774 TMEM268Q5VZI3 342 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 TMEM200AQ86VY9 491 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 Q96M66 194 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 TMEM231Q9H6L2 316 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 PARP11Q9NR21 331 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 PLEKHJ1Q9NW61 149 aa11.65□□□□□ -0.55
SRP54-201ENST00000216774 ABCA7Q8IZY2 2146 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 IGHV5-10-1A0A0J9YXX1 117 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 OR5H15A6NDH6 313 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 CRYM-AS1A6NIL9 109 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 K7EPK0 472 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 M0R135 149 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 MED6O75586 246 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 DEDDO75618 318 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 IFNA21P01568 189 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 SERPINA5P05154 406 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 RPL12P30050 165 aaKnown RBP11.64□□□□□ -0.55
SRP54-201ENST00000216774 NPBWR1P48145 328 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 DMRTC1Q5HYR2 192 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 PHYHD1Q5SRE7 291 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 TMEM123Q8N131 208 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 FAM71E2Q8N5Q1 922 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 WNT2BQ93097 391 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 SPTSSAQ969W0 71 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 INTS12Q96CB8 462 aaKnown RBP11.64□□□□□ -0.55
SRP54-201ENST00000216774 CPNE2Q96FN4 548 aaPredicted RBP11.64□□□□□ -0.55
SRP54-201ENST00000216774 ZNF799Q96GE5 643 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 ZNF2Q9BSG1 426 aaPredicted RBP11.64□□□□□ -0.55
SRP54-201ENST00000216774 ELL3Q9HB65 397 aaPredicted RBP11.64□□□□□ -0.55
SRP54-201ENST00000216774 ANXA10Q9UJ72 324 aa11.64□□□□□ -0.55
SRP54-201ENST00000216774 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 NPIPA2E9PIF3 369 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 NPIPA3F8WFD2 350 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 RNASEK-C17orf49H0YIS7 233 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 DHHO43323 396 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 CD5P06127 495 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 RAB13P51153 203 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 F2RL1P55085 397 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 PRAMEF20Q5VT98 475 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 LCN10Q6JVE6 187 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 RPUSD3Q6P087 351 aaKnown RBP11.63□□□□□ -0.55
SRP54-201ENST00000216774 MRPL14Q6P1L8 145 aaKnown RBP11.63□□□□□ -0.55
SRP54-201ENST00000216774 OPN5Q6U736 354 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 BTNL8Q6UX41 500 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 PLXDC2Q6UX71 529 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 C6orf201Q7Z4U5 140 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 PPP1R3BQ86XI6 285 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 SPEM1Q8N4L4 309 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 PIGTQ969N2 578 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 SPSB1Q96BD6 273 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 PIGQQ9BRB3 760 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 DUSP23Q9BVJ7 150 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 HSF4Q9ULV5 492 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 FAM96BQ9Y3D0 163 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 A0A1W2PQM1 296 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 F12P00748 615 aaPredicted RBP11.63□□□□□ -0.55
SRP54-201ENST00000216774 FCGR3AP08637 254 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 CD63P08962 238 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 SFTA3P0C7M3 94 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 SUCLG1P53597 346 aaKnown RBP11.63□□□□□ -0.55
SRP54-201ENST00000216774 SPEM2Q0P670 501 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 GUSBP11Q6P575 273 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 GALNTL5Q7Z4T8 443 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 SKA3Q8IX90 412 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 OR9K2Q8NGE7 335 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 NAA11Q9BSU3 229 aaPredicted RBP11.63□□□□□ -0.55
SRP54-201ENST00000216774 WDR54Q9H977 334 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 PLEKHA2Q9HB19 425 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 PADI1Q9ULC6 663 aa11.63□□□□□ -0.55
SRP54-201ENST00000216774 RCC1P18754 421 aaPredicted RBP11.62□□□□□ -0.55
SRP54-201ENST00000216774 GABRR1P24046 479 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 CCL7P80098 99 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 ZNF528Q3MIS6 628 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 OR2A2Q6IF42 318 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 DTX1Q86Y01 620 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 FAM219AQ8IW50 185 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 FOXRED2Q8IWF2 684 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 LRRC18Q8N456 261 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 CCDC74BQ96LY2 380 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 ZNF385AQ96PM9 386 aaKnown RBP11.62□□□□□ -0.55
SRP54-201ENST00000216774 PRRX2Q99811 253 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 METTL9Q9H1A3 318 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 FOXD3Q9UJU5 478 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms