RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 IL36GQ9NZH8 169 aa15.04■□□□□ -0
VRK1-201ENST00000216639 ANAPC10Q9UM13 185 aa15.04■□□□□ -0
VRK1-201ENST00000216639 STARD10Q9Y365 291 aa15.04■□□□□ -0
VRK1-201ENST00000216639 FREM1Q5H8C1 2179 aa15.03■□□□□ -0
VRK1-201ENST00000216639 MKRN2OSH3BPM6 223 aa15.03■□□□□ -0
VRK1-201ENST00000216639 J3QW42 95 aa15.03■□□□□ -0
VRK1-201ENST00000216639 ANGPTL7O43827 346 aa15.03■□□□□ -0
VRK1-201ENST00000216639 PLATP00750 562 aa15.03■□□□□ -0
VRK1-201ENST00000216639 CST4P01036 141 aa15.03■□□□□ -0
VRK1-201ENST00000216639 NAT1P18440 290 aa15.03■□□□□ -0
VRK1-201ENST00000216639 HOXC12P31275 282 aa15.03■□□□□ -0
VRK1-201ENST00000216639 CXADRP78310 365 aa15.03■□□□□ -0
VRK1-201ENST00000216639 PDZK1IP1Q13113 114 aa15.03■□□□□ -0
VRK1-201ENST00000216639 OR52W1Q6IF63 320 aa15.03■□□□□ -0
VRK1-201ENST00000216639 ZNF585AQ6P3V2 769 aa15.03■□□□□ -0
VRK1-201ENST00000216639 SLC36A1Q7Z2H8 476 aa15.03■□□□□ -0
VRK1-201ENST00000216639 C9orf106Q8NAJ2 232 aa15.03■□□□□ -0
VRK1-201ENST00000216639 OR4K15Q8NH41 348 aa15.03■□□□□ -0
VRK1-201ENST00000216639 Q96M66 194 aa15.03■□□□□ -0
VRK1-201ENST00000216639 SLC6A7Q99884 636 aa15.03■□□□□ -0
VRK1-201ENST00000216639 TMEM82A0PJX8 343 aa15.03■□□□□ -0
VRK1-201ENST00000216639 FABP7O15540 132 aa15.03■□□□□ -0
VRK1-201ENST00000216639 RAD51DO75771 328 aa15.03■□□□□ -0
VRK1-201ENST00000216639 WISP2O76076 250 aa15.03■□□□□ -0
VRK1-201ENST00000216639 CSN2P05814 226 aa15.03■□□□□ -0
VRK1-201ENST00000216639 CXCL3P19876 107 aa15.03■□□□□ -0
VRK1-201ENST00000216639 GABRR1P24046 479 aa15.03■□□□□ -0
VRK1-201ENST00000216639 HRH1P35367 487 aa15.03■□□□□ -0
VRK1-201ENST00000216639 KIR2DL2P43627 348 aaPredicted RBP15.03■□□□□ -0
VRK1-201ENST00000216639 PRDX4Q13162 271 aa15.03■□□□□ -0
VRK1-201ENST00000216639 NKPD1Q17RQ9 610 aa15.03■□□□□ -0
VRK1-201ENST00000216639 NSUN5P2Q63ZY6 315 aa15.03■□□□□ -0
VRK1-201ENST00000216639 CD163Q86VB7 1156 aa15.03■□□□□ -0
VRK1-201ENST00000216639 ZDHHC23Q8IYP9 409 aa15.03■□□□□ -0
VRK1-201ENST00000216639 SPICQ8N5J4 248 aa15.03■□□□□ -0
VRK1-201ENST00000216639 ZSCAN4Q8NAM6 433 aaPredicted RBP15.03■□□□□ -0
VRK1-201ENST00000216639 HIST1H2AAQ96QV6 131 aa15.03■□□□□ -0
VRK1-201ENST00000216639 PLEKHJ1Q9NW61 149 aa15.03■□□□□ -0
VRK1-201ENST00000216639 GPR160Q9UJ42 338 aa15.03■□□□□ -0
VRK1-201ENST00000216639 ZNHIT1O43257 154 aa15.02□□□□□ -0.01
VRK1-201ENST00000216639 AKR7A2O43488 359 aa15.02□□□□□ -0.01
VRK1-201ENST00000216639 NGFP01138 241 aa15.02□□□□□ -0.01
VRK1-201ENST00000216639 VSIG10L2P0DP72 767 aa15.02□□□□□ -0.01
VRK1-201ENST00000216639 PER3P56645 1201 aa15.02□□□□□ -0.01
VRK1-201ENST00000216639 HLXQ14774 488 aaPredicted RBP15.02□□□□□ -0.01
VRK1-201ENST00000216639 C4orf46Q504U0 113 aa15.02□□□□□ -0.01
VRK1-201ENST00000216639 INO80CQ6PI98 192 aaPredicted RBP15.02□□□□□ -0.01
VRK1-201ENST00000216639 C1orf162Q8NEQ5 155 aaPredicted RBP15.02□□□□□ -0.01
VRK1-201ENST00000216639 ST8SIA4Q92187 359 aa15.02□□□□□ -0.01
VRK1-201ENST00000216639 MS4A3Q96HJ5 214 aa15.02□□□□□ -0.01
VRK1-201ENST00000216639 ZNF436Q9C0F3 470 aaPredicted RBP15.02□□□□□ -0.01
VRK1-201ENST00000216639 TNRC6AQ8NDV7 1962 aaKnown RBP15.02□□□□□ -0.01
VRK1-201ENST00000216639 FAM172BPA6NC97 362 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 LYZL6O75951 148 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 CDK10Q15131 360 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 GABRA6Q16445 453 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 CEACAM21Q3KPI0 293 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 RTN4RL2Q86UN3 420 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 OSR2Q8N2R0 312 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 OR51F2Q8NH61 342 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 POM121Q96HA1 1249 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 ZNF75AQ96N20 296 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 POFUT1Q9H488 388 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 CDH20Q9HBT6 801 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 MYOZ1Q9NP98 299 aaPredicted RBP15.01□□□□□ -0.01
VRK1-201ENST00000216639 MGAT4CQ9UBM8 478 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 HSF4Q9ULV5 492 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 NPTNQ9Y639 398 aa15.01□□□□□ -0.01
VRK1-201ENST00000216639 CNOT1A5YKK6 2376 aaKnown RBP15.01□□□□□ -0.01
VRK1-201ENST00000216639 PQLC2LA1A4F0 135 aa15□□□□□ -0.01
VRK1-201ENST00000216639 ANKRD30BLA7E2S9 258 aa15□□□□□ -0.01
VRK1-201ENST00000216639 CD300LBA8K4G0 201 aa15□□□□□ -0.01
VRK1-201ENST00000216639 WNT5AP41221 380 aa15□□□□□ -0.01
VRK1-201ENST00000216639 NKAPLQ5M9Q1 402 aa15□□□□□ -0.01
VRK1-201ENST00000216639 VAX1Q5SQQ9 334 aa15□□□□□ -0.01
VRK1-201ENST00000216639 HOGA1Q86XE5 327 aa15□□□□□ -0.01
VRK1-201ENST00000216639 RBMXL3Q8N7X1 1067 aaKnown RBP15□□□□□ -0.01
VRK1-201ENST00000216639 ZDHHC22Q8N966 263 aa15□□□□□ -0.01
VRK1-201ENST00000216639 ZFAND1Q8TCF1 268 aa15□□□□□ -0.01
VRK1-201ENST00000216639 FBXW5Q969U6 566 aa15□□□□□ -0.01
VRK1-201ENST00000216639 WBP1Q96G27 269 aa15□□□□□ -0.01
VRK1-201ENST00000216639 BOD1Q96IK1 185 aa15□□□□□ -0.01
VRK1-201ENST00000216639 PLSCR4Q9NRQ2 329 aa15□□□□□ -0.01
VRK1-201ENST00000216639 SMLR1H3BR10 107 aa15□□□□□ -0.01
VRK1-201ENST00000216639 PMP2P02689 132 aa15□□□□□ -0.01
VRK1-201ENST00000216639 PDGFAP04085 211 aa15□□□□□ -0.01
VRK1-201ENST00000216639 ZNF14P17017 642 aaPredicted RBP15□□□□□ -0.01
VRK1-201ENST00000216639 AMY2BP19961 511 aa15□□□□□ -0.01
VRK1-201ENST00000216639 COX5AP20674 150 aa15□□□□□ -0.01
VRK1-201ENST00000216639 PTGER4P35408 488 aa15□□□□□ -0.01
VRK1-201ENST00000216639 TAS2R46P59540 309 aa15□□□□□ -0.01
VRK1-201ENST00000216639 EIF2S3LQ2VIR3 472 aaKnown RBP15□□□□□ -0.01
VRK1-201ENST00000216639 VWA1Q6PCB0 445 aa15□□□□□ -0.01
VRK1-201ENST00000216639 TMED4Q7Z7H5 227 aa15□□□□□ -0.01
VRK1-201ENST00000216639 SAXO1Q8IYX7 474 aa15□□□□□ -0.01
VRK1-201ENST00000216639 ARRDC1Q8N5I2 433 aa15□□□□□ -0.01
VRK1-201ENST00000216639 ZNF611Q8N823 705 aa15□□□□□ -0.01
VRK1-201ENST00000216639 OR13C8Q8NGS7 320 aa15□□□□□ -0.01
VRK1-201ENST00000216639 OR5H2Q8NGV7 314 aa15□□□□□ -0.01
VRK1-201ENST00000216639 ZNF431Q8TF32 576 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms