RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 MAST2Q6P0Q8 1798 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 NKX6-3A6NJ46 265 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ABHD16AO95870 558 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 TRGC2P03986 189 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 MYPOPQ86VE0 399 aaPredicted RBP9.38□□□□□ -0.91
VCL-201ENST00000211998 RAB24Q969Q5 203 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 DEGS1O15121 323 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 TMPRSS11DO60235 418 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 SEMG1P04279 462 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 FBP1P09467 338 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 HMGA1P17096 107 aaKnown RBP9.38□□□□□ -0.91
VCL-201ENST00000211998 MDKP21741 143 aaPredicted RBP9.38□□□□□ -0.91
VCL-201ENST00000211998 CYB561P49447 251 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 HINT1P49773 126 aaPredicted RBP9.38□□□□□ -0.91
VCL-201ENST00000211998 TMPRSS11FQ6ZWK6 438 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ARHGEF39Q8N4T4 335 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ARIH2OSQ8N7S6 290 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 GHITMQ9H3K2 345 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 CBLN4Q9NTU7 201 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 MICAL3Q7RTP6 2002 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 A0A1W2PR48 441 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 A6NDN8 102 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 TMEM202A6NGA9 273 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 GFYI3L273 518 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 NXPH2O95156 264 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 IL3RAP26951 378 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 RPL18Q07020 188 aaKnown RBP9.38□□□□□ -0.91
VCL-201ENST00000211998 FFAR4Q5NUL3 377 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ZNF660Q6AZW8 331 aaPredicted RBP9.38□□□□□ -0.91
VCL-201ENST00000211998 ADGRG7Q96K78 797 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 PBX4Q9BYU1 374 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 PBOV1Q9GZY1 135 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 TMEM191AQ9H0A3 160 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ADPRHP54922 357 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 PRTGQ2VWP7 1150 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 Q7L0L9 218 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 OR2C3Q8N628 320 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 SLC2A8Q9NY64 477 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ZNF749O43361 778 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 APOBEC1P41238 236 aaKnown RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 CDX1P47902 265 aaPredicted RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 IL10RAQ13651 578 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 ZNF345Q14585 488 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 DHRS7BQ6IAN0 325 aaPredicted RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 H1FNTQ75WM6 255 aaPredicted RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 OR4D9Q8NGE8 314 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 IP6K3Q96PC2 410 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 EMC6Q9BV81 110 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 PHF7Q9BWX1 381 aaPredicted RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 CALHM2Q9HA72 323 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 TNFSF18Q9UNG2 199 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 C4orf47A7E2U8 309 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 DIRC3C9JPN6 131 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 TOX3O15405 576 aaPredicted RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 ZFPL1O95159 310 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 GUSBP08236 651 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 CNN1P51911 297 aaKnown RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 IL13RA2Q14627 380 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 IRF3Q14653 427 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 TMEM251Q8N6I4 163 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 OR52N5Q8NH56 324 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 PRR13Q9NZ81 148 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 TREM2Q9NZC2 230 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 TMED3Q9Y3Q3 217 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 FBLL1A6NHQ2 334 aaKnown RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 CCR5P51681 352 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 TBC1D28Q2M2D7 210 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 APH1AQ96BI3 265 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 SLC35E1Q96K37 410 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 TLNRD1Q9H1K6 362 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 SERPINE3A8MV23 424 aa9.37□□□□□ -0.91
VCL-201ENST00000211998 C19orf53Q9UNZ5 99 aaPredicted RBP9.37□□□□□ -0.91
VCL-201ENST00000211998 PIAS2O75928 621 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 CD1CP29017 333 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 HMGA2P52926 109 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 LINC00696Q6ZRV3 163 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 GPR61Q9BZJ8 451 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 PLAC1Q9HBJ0 212 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.36□□□□□ -0.91
VCL-201ENST00000211998 HPP00738 406 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 ACAA2P42765 397 aaKnown RBP9.36□□□□□ -0.91
VCL-201ENST00000211998 OR1D5P58170 312 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 Q5PR19 223 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 FAHD2BQ6P2I3 314 aaPredicted RBP9.36□□□□□ -0.91
VCL-201ENST00000211998 PARM1Q6UWI2 310 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 C6orf15Q6UXA7 325 aaPredicted RBP9.36□□□□□ -0.91
VCL-201ENST00000211998 M1APQ8TC57 530 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 SLC37A2Q8TED4 501 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 NEIL1Q96FI4 390 aaPredicted RBP9.36□□□□□ -0.91
VCL-201ENST00000211998 FAHD2AQ96GK7 314 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 GINS3Q9BRX5 216 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 ATG101Q9BSB4 218 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 PPP1R3EQ9H7J1 279 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 ZNF275Q9NSD4 429 aaPredicted RBP9.36□□□□□ -0.91
VCL-201ENST00000211998 GAGE10A6NGK3 116 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 LRRC30A6NM36 301 aa9.36□□□□□ -0.91
VCL-201ENST00000211998 VAMP5O95183 116 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms