RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CHAF1BQ13112 559 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 KRBOX4Q5JUW0 171 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 SLC25A47Q6Q0C1 308 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 C17orf82Q86X59 251 aaPredicted RBP12.31□□□□□ -0.44
USH1C-201ENST00000005226 EMG1Q92979 244 aaKnown RBP12.31□□□□□ -0.44
USH1C-201ENST00000005226 SHDQ96IW2 340 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 SCGB3A2Q96PL1 93 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 SDHAF3Q9NRP4 125 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 SMCO4Q9NRQ5 59 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 C2CD4DB7Z1M9 353 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 TIAF1O95411 115 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 LTBRP36941 435 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 SMCO1Q147U7 214 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 PLPPR5Q32ZL2 321 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 MIDNQ504T8 468 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 ANKRD37Q7Z713 158 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 FAM89BQ8N5H3 189 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 FNDC9Q8TBE3 224 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 SLC25A43Q8WUT9 341 aaPredicted RBP12.3□□□□□ -0.44
USH1C-201ENST00000005226 PRRX2Q99811 253 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 FAAP24Q9BTP7 215 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 WFDC1Q9HC57 220 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 IGHV3-15A0A0B4J1V0 119 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 hCG_1809904A0A1W2PP81 198 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 A0A1W2PPH5 198 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 A0A1W2PR64 198 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 A0A1W2PRV1 198 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 M0R036 132 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 SGCEO43556 437 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 IGLV3-19P01714 112 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 ARG1P05089 322 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 PET100P0DJ07 73 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 NOVA1P51513 510 aaKnown RBP12.3□□□□□ -0.44
USH1C-201ENST00000005226 DVL1P1P54792 670 aaPredicted RBP12.3□□□□□ -0.44
USH1C-201ENST00000005226 RAB5BP61020 215 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 PHYHD1Q5SRE7 291 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 DOK3Q7L591 496 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 SULF2Q8IWU5 870 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 D2HGDHQ8N465 521 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 NFAM1Q8NET5 270 aaPredicted RBP12.3□□□□□ -0.44
USH1C-201ENST00000005226 TSTD1Q8NFU3 115 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 SSC4DQ8WTU2 575 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 ZNF501Q96CX3 271 aaPredicted RBP12.3□□□□□ -0.44
USH1C-201ENST00000005226 RAB33BQ9H082 229 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 METTL7AQ9H8H3 244 aa12.3□□□□□ -0.44
USH1C-201ENST00000005226 FOXI3A8MTJ6 420 aaPredicted RBP12.29□□□□□ -0.44
USH1C-201ENST00000005226 LMO7DNF2Z398 122 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 OR2J2O76002 312 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 HEXBP07686 556 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 ZNF43P17038 809 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 PTAFRP25105 342 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 CLDN17P56750 224 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 TAS2R46P59540 309 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 PDCD1Q15116 288 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 AWAT1Q58HT5 328 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 PRAMEF20Q5VT98 475 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 EIF5AL1Q6IS14 154 aaKnown RBP12.29□□□□□ -0.44
USH1C-201ENST00000005226 OR6S1Q8NH40 331 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 SH3BGRL3Q9H299 93 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 ZNF160Q9HCG1 818 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 ADAMTS9Q9P2N4 1935 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 C7orf77A4D0Y5 90 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 FIGNL2A6NMB9 653 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 ZNF726A6NNF4 738 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 TSPAN15O95858 294 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 TMEM225BP0DP42 221 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 FXYD4P59646 89 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 EIF2S3LQ2VIR3 472 aaKnown RBP12.29□□□□□ -0.44
USH1C-201ENST00000005226 PLPP5Q8NEB5 264 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 OR9K2Q8NGE7 335 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 EIF5A2Q9GZV4 153 aaKnown RBP12.29□□□□□ -0.44
USH1C-201ENST00000005226 PLEKHJ1Q9NW61 149 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 C1orf123Q9NWV4 160 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 PIGLQ9Y2B2 252 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 MEMO1Q9Y316 297 aa12.29□□□□□ -0.44
USH1C-201ENST00000005226 NPIPB13A6NJU9 1138 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 C1orf196B1AJZ1 125 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 NPIPB4C9JG80 1138 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 SPRY1O43609 319 aaPredicted RBP12.28□□□□□ -0.44
USH1C-201ENST00000005226 DEDDO75618 318 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 THBS4P35443 961 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 PTGDSP41222 190 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 TAF9Q16594 264 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 SKA3Q8IX90 412 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 BATF2Q8N1L9 274 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 S100A13Q99584 98 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
USH1C-201ENST00000005226 PARP11Q9NR21 331 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 GPR173Q9NS66 373 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 NXT1Q9UKK6 140 aaKnown RBP12.28□□□□□ -0.44
USH1C-201ENST00000005226 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 MASP2O00187 686 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 TAAR5O14804 337 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 MBPP02686 304 aaPredicted RBP12.28□□□□□ -0.44
USH1C-201ENST00000005226 IFNA4P05014 189 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 S100A6P06703 90 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 PNLIPP16233 465 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 CD27P26842 260 aa12.28□□□□□ -0.44
USH1C-201ENST00000005226 RSPO1Q2MKA7 263 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms