RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Tspan31Q9CQ88 210 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Dtd1Q9DD18 209 aaKnown RBP13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 RnlsA7RDN6 342 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Gm6569D3YTM9 175 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 March9Q3TZ87 348 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Gm10644Q3TZG3 87 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Defb28Q3V2L0 89 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Klf4Q60793 483 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr506Q7TRU6 314 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Ino80cQ8BHA0 191 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Cmtm4Q8CJ61 208 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr1284Q8VF29 311 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Tctex1d2Q9CQ66 144 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Samd8Q9DA37 478 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Tmem239Q9DA47 151 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Ntn4Q9JI33 628 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Igkv12-46A0A140T8P6 115 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Esp6A8R0U0 136 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Vmn1r138D3YTY2 306 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Gm8693E9PW18 306 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr231E9Q0M4 307 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Gm4498K9J7G4 306 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Vmn1r118L7N273 306 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Lin7cO88952 197 aaKnown RBP13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Fli1P26323 452 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Col9a2Q07643 688 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr1396Q7TQS8 315 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Q80W69 301 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Mfsd9Q8C0T7 466 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Lmf2Q8C3X8 702 aaKnown RBP13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Utp4Q8R2N2 686 aaKnown RBP13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Trappc4Q9ES56 219 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Zic1P46684 447 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 RorcP51450 516 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 SordQ64442 357 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 St8sia1Q64687 355 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Ceacam14Q78Y72 263 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr775Q7TRI4 312 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Alkal2Q80UG6 151 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Tceal5Q8CCT4 200 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Chrnb4Q8R493 495 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Thoc3Q8VE80 351 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr60Q8VGL4 311 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Rnaseh2cQ9CQ18 166 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Snapc3Q9D2C9 407 aa13.41□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Tmem240B2RWJ3 173 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Gm9972E9Q053 102 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Mtnd6P03925 172 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Nme1P15532 152 aaKnown RBP13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Adrb2P18762 418 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Ccr2P51683 373 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Tmprss9P69525 1065 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Acp5Q05117 327 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr1222Q7TR02 311 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Bhlhe23Q8BGW3 223 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Gjc3Q921C1 269 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Q9CQT9 129 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Qrsl1Q9CZN8 525 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Stc2O88452 296 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Hoxc8P09025 242 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Hoxd8P23463 289 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Hoxd12P23812 268 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 EbpP70245 230 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Rnf223Q3UV31 285 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Itgb2lQ3UV74 738 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Cstl1Q80Y72 140 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Mr1Q8HWB0 341 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Ackr4Q924I3 350 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Tmem218Q9CQ44 115 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Emc6Q9CQW0 110 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr568E9Q554 313 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 NppaP05125 152 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Dok1P97465 482 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 SccpdhQ8R127 429 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Slc7a12Q8VIE6 465 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Cryzl1Q921W4 348 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Cpn1Q9JJN5 457 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 TpbgQ9Z0L0 426 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Bpnt1Q9Z0S1 308 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Myh13B1AR69 1938 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Trbv21A0A0A6YX06 97 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Ccdc9bA3KGF9 545 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 NrasP08556 189 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Ptpn6P29351 595 aaKnown RBP13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Slc17a4Q5NCM1 492 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Marveld1Q7TQJ1 173 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 WtipQ7TQJ8 398 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Olfr1344Q7TQV3 321 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Cacfd1Q8BG21 171 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Mic13Q8R404 119 aaKnown RBP13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Dusp7Q91Z46 422 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Nkx6-1Q99MA9 365 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Tmem25Q9DCF1 365 aa13.4□□□□□ -0.26
Pcdh20-201ENSMUST00000061628 Pira2F8VQ94 680 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 RrasP10833 218 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 HbegfQ06186 208 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Scarb1Q61009 509 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Mtch1Q791T5 389 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Tsen54Q8C2A2 525 aa13.39□□□□□ -0.27
Pcdh20-201ENSMUST00000061628 Btnl10Q9JK39 275 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms